List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 108539

ATP synthase
This group has 68 members: 68 [B]acteria
Fingerprint: KTEEFVA

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Caulobacter crescentusCAUCR00363  UniProtKB/Swiss-Prot ATPF_CAUCR  ATP synthase subunit b
[B] Caulobacter sp. (strain K31)CAUSK04297  UniProtKB/Swiss-Prot ATPF_CAUSK  H+transporting two-sector ATPase B/B' subunit
[B] Phenylobacterium zucineum (strain HLK1)PHEZH00587  UniProtKB/Swiss-Prot ATPF_PHEZH  ATP synthase F0, B subunit
[B] Bartonella bacilliformis (strain ATCC 35685 / KC583)BARBK00357  UniProtKB/Swiss-Prot ATPF_BARBK  ATP synthase F0, B subunit family protein
[B] Bartonella henselaeBARHE00402  UniProtKB/Swiss-Prot ATPF2_BARHE  ATP synthase B chain
[B] Bartonella quintanaBARQU00309  UniProtKB/Swiss-Prot ATPF2_BARQU  ATP synthase B chain
[B] Bartonella tribocorum (strain CIP 105476 / IBS 506)BART100513  UniProtKB/Swiss-Prot ATPF2_BART1  ATP synthase, B chain InterPro; H+-transporting two-sector ATPase B/B subunit hypothetical protein
[B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII900728  UniProtKB/Swiss-Prot ATPF1_BEII9  H+transporting two-sector ATPase B/B' subunit
[B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)METSB03714  UniProtKB/TrEMBL B8EMM2  H+transporting two-sector ATPase B/B' subunit
[B] Bradyrhizobium japonicumBRAJA01183  UniProtKB/Swiss-Prot ATPF_BRAJA  ATP synthase subunit b
[B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB00790  UniProtKB/Swiss-Prot ATPF_BRASB  ATP synthase subunit B, membrane-bound, F0 sector
[B] Bradyrhizobium sp. (strain ORS278)BRASO06302  UniProtKB/Swiss-Prot ATPF_BRASO  ATP synthase subunit B, membrane-bound, F0 sector
[B] Nitrobacter hamburgensis (strain X14 / DSM 10229)NITHX00260  UniProtKB/Swiss-Prot ATPF_NITHX  H+-transporting two-sector ATPase, B/B' subunit
[B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)NITWN00221  UniProtKB/Swiss-Prot ATPF_NITWN  H+-transporting two-sector ATPase, B/B' subunit
[B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)OLICO00687  UniProtKB/Swiss-Prot ATPF_OLICO  ATP synthase subunit b
[B] Rhodopseudomonas palustrisRHOPA00842  UniProtKB/Swiss-Prot ATPF_RHOPA  observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished putative Fo ATP synthase B chain
[B] Rhodopseudomonas palustris (strain BisA53)RHOP504707  UniProtKB/Swiss-Prot ATPF_RHOP5  H+-transporting two-sector ATPase, B/B' subunit PFAM: H+-transporting two-sector ATPase, B/B' subunit KEGG: rpc:RPC_4813 H+-transporting two-sector ATPase, B/B' subunit
[B] Rhodopseudomonas palustris (strain BisB18)RHOPB04732  UniProtKB/Swiss-Prot ATPF_RHOPB  H+-transporting two-sector ATPase, B/B' subunit
[B] Rhodopseudomonas palustris (strain BisB5)RHOPS00821  UniProtKB/Swiss-Prot ATPF_RHOPS  H+-transporting two-sector ATPase, B/B' subunit
[B] Rhodopseudomonas palustris (strain HaA2)RHOP204542  UniProtKB/Swiss-Prot ATPF_RHOP2  H+-transporting two-sector ATPase, B/B' subunit
[B] Rhodopseudomonas palustris (strain TIE-1)RHOPT00906  UniProtKB/Swiss-Prot ATPF_RHOPT  H+transporting two-sector ATPase B/B' subunit
[B] Brucella abortusBRUAB00383  UniProtKB/TrEMBL C4INE2  similar to BR0385, ATP synthase F0, B subunit AtpF, ATP synthase F0, B subunit
[B] Brucella abortus (strain 2308)BRUA200410  UniProtKB/Swiss-Prot ATPF2_BRUA2  H+-transporting two-sector ATPase, B/B' subunit:ATP synthase F0, subunit B
[B] Brucella abortus (strain S19)BRUA100357  UniProtKB/Swiss-Prot ATPF2_BRUA1  H+-transporting two-sector ATPase, B/B' subunit
[B] Brucella canis (strain ATCC 23365 / NCTC 10854)BRUC200367  UniProtKB/Swiss-Prot ATPF2_BRUC2  ATP synthase B chain
[B] Brucella melitensisBRUME01531  UniProtKB/TrEMBL Q8YFH8  ATP SYNTHASE B CHAIN
[B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO200353  UniProtKB/Swiss-Prot ATPF2_BRUO2  ATP synthase F0, B subunit
[B] Brucella suisBRUSU00373  UniProtKB/Swiss-Prot ATPF2_BRUSU  identified by match to TIGR protein family HMM TIGR01144 ATP synthase F0, B subunit
[B] Brucella suis (strain ATCC 23445 / NCTC 10510)BRUSI00386  UniProtKB/Swiss-Prot ATPF2_BRUSI  ATP synthase F0, B subunit GO_component: plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [GO ID 0045264]; GO_function: hydrogen ion transporting ATP synthase activity, rotational mechanism [GO ID 0046933]; GO_process: ATP synthesis coupled proton transport [GO ID 0015986]
[B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)OCHA400501  UniProtKB/Swiss-Prot ATPF2_OCHA4  ATP synthase B chain
[B] Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688)METC403329  UniProtKB/TrEMBL B7KVA8  H+transporting two-sector ATPase B/B' subunit PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3172 H+transporting two-sector ATPase B/B' subunit
[B] Methylobacterium extorquens (strain PA1)METEP03123  UniProtKB/Swiss-Prot ATPF_METEP  H+transporting two-sector ATPase B/B' subunit
[B] Methylobacterium nodulans (strain ORS2060 / LMG 21967)METNO07180  UniProtKB/TrEMBL B8IQU5  H+transporting two-sector ATPase B/B' subunit
[B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB03308  UniProtKB/Swiss-Prot ATPF_METPB  H+transporting two-sector ATPase B/B' subunit
[B] Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)METRJ00691  UniProtKB/Swiss-Prot ATPF_METRJ  H+transporting two-sector ATPase B/B' subunit
[B] Methylobacterium sp. (strain 4-46)METS406547  UniProtKB/Swiss-Prot ATPF_METS4  H+transporting two-sector ATPase B/B' subunit
[B] Mesorhizobium sp. (strain BNC1)MESSB00694  UniProtKB/Swiss-Prot ATPF2_MESSB  ATP synthase F0, B subunit TIGRFAM: ATP synthase F0, B subunit PFAM: H+-transporting two-sector ATPase, B/B' subunit KEGG: mlo:mlr7415 F-type H+-transporting ATPase b chain
[B] Rhizobium lotiRHILO05815  UniProtKB/Swiss-Prot ATPF2_RHILO  Fo ATP synthase B chain
[B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)PARL100694  UniProtKB/Swiss-Prot ATPF1_PARL1  H+transporting two-sector ATPase B/B' subunit
[B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK00846  UniProtKB/TrEMBL B9JA31  ATP synthase F0, B subunit
[B] Agrobacterium tumefaciens (strain C58 / ATCC 33970)AGRT500700  UniProtKB/Swiss-Prot ATPF_AGRT5  ATP synthase subunit b
[B] Rhizobium etli (strain CFN 42 / ATCC 51251)RHIEC00837  UniProtKB/Swiss-Prot ATPF_RHIEC  ATP synthase protein, subunit B similar to atpF (SMc00868) [Sinorhizobium meliloti] Similar to swissprot:Q92RM5 Putative location:bacterial periplasmic space Psort-Score: 0.9338; go_component: proton-transporting ATP synthase complex, coupling factor F(o) (sensu Bacteria) [goid 0045264]; go_function: hydrolase activity [goid 0016787]; go_process: proton transport [goid 0015992]; go_process: hydrogen transport [goid 0006818]
[B] Rhizobium etli (strain CIAT 652)RHIE600940  UniProtKB/Swiss-Prot ATPF_RHIE6  ATP synthase protein, subunit B
[B] Rhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW00508  UniProtKB/Swiss-Prot ATPF_RHILW  ATP synthase subunit b
[B] Rhizobium leguminosarum bv. viciae (strain 3841)RHIL300935  UniProtKB/Swiss-Prot ATPF_RHIL3  putative ATP synthase B chain precursor similarity:fasta; with=UniProt:ATPF_RHORU (EMBL:RRF0ATP); Rhodospirillum rubrum.; atpF;; ATP synthase B chain precursor (EC 3.6.3.14) (Subunit I). ATP synthase B chain precursor (EC 3.6.3.14) (Subunit I).; length=182; id 32.500; 160 aa overlap; query 3-162; subject 24-182 similarity:fasta; with=UniProt:Q92RM5 (EMBL:SME591785); Rhizobium meliloti (Sinorhizobium meliloti).; PROBABLE ATP SYNTHASE B CHAIN TRANSMEMBRANE PROTEIN (EC 3.6.1.34).; length=161; id 74.214; 159 aa overlap; query 4-162; subject 3-161
[B] Rhizobium melilotiRHIME00827  UniProtKB/Swiss-Prot ATPF_RHIME  Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE ATP SYNTHASE B CHAIN TRANSMEMBRANE PROTEIN
[B] Sinorhizobium medicae (strain WSM419)SINMW00445  UniProtKB/Swiss-Prot ATPF_SINMW  ATP synthase B chain
[B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)AZOC504252  UniProtKB/Swiss-Prot ATPF_AZOC5  Putative Fo ATP synthase B chain
[B] Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)XANP201914  UniProtKB/Swiss-Prot ATPF1_XANP2  H+transporting two-sector ATPase B/B' subunit
[B] Maricaulis maris (strain MCS10)MARMM02198  UniProtKB/Swiss-Prot ATPF2_MARMM  H+-transporting two-sector ATPase, B/B' subunit
[B] Dinoroseobacter shibae (strain DFL 12)DINSH02993  UniProtKB/Swiss-Prot ATPF2_DINSH  H+transporting two-sector ATPase B/B' subunit precursor
[B] Jannaschia sp. (strain CCS1)JANSC00768  UniProtKB/Swiss-Prot ATPF_JANSC  H+-transporting two-sector ATPase, B/B' subunit
[B] Paracoccus denitrificans (strain Pd 1222)PARDP02789  UniProtKB/Swiss-Prot ATPF_PARDP  H+-transporting two-sector ATPase, B/B' subunit PFAM: H+-transporting two-sector ATPase, B/B' subunit KEGG: rsp:RSP_1035 FoF1 ATP synthase, subunit B
[B] Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)RHOS402648  UniProtKB/Swiss-Prot ATPF_RHOS4  Citation: Arch. Microbiol. 170 (5), 385-388 (1998) MEDLINE 99035763 PUBMED 9818357. FoF1 ATP synthase, subunit B
[B] Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS500185  UniProtKB/Swiss-Prot ATPF_RHOS5  H+-transporting two-sector ATPase, B/B' subunit precursor
[B] Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)RHOS102659  UniProtKB/Swiss-Prot ATPF_RHOS1  H+-transporting two-sector ATPase, B/B' subunit PFAM: H+-transporting two-sector ATPase, B/B' subunit KEGG: rsp:RSP_1035 FoF1 ATP synthase, subunit B
[B] Rhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK02407  UniProtKB/TrEMBL B9KNW7  FoF1 ATP synthase, subunit B
[B] Silicibacter pomeroyiSILPO03150  UniProtKB/Swiss-Prot ATPF_SILPO  identified by similarity to SP:P20601; match to protein family HMM PF00430 ATP synthase F0, B subunit
[B] Silicibacter sp. (strain TM1040)SILST02581  UniProtKB/Swiss-Prot ATPF_SILST  H+-transporting two-sector ATPase, B/B' subunit PFAM: H+-transporting two-sector ATPase, B/B' subunit: (1.8e-17) KEGG: sil:SPO3233 ATP synthase F0, B subunit, ev=1e-53, 63% identity
[B] Acidiphilium cryptum (strain JF-5)ACICJ00387  UniProtKB/Swiss-Prot ATPF1_ACICJ  H+-transporting two-sector ATPase, B/B' subunit
[B] Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)GLUDA01134  UniProtKB/Swiss-Prot ATPF_GLUDA  Putative ATP synthase
[B] Granulobacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)GRABC01868  UniProtKB/Swiss-Prot ATPF2_GRABC  ATP synthase B chain
[B] Rhodospirillum centenum (strain ATCC 51521 / SW)RHOCS03423  UniProtKB/Swiss-Prot ATPF2_RHOCS  ATP synthase F0, B subunit
[B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)RHORT03230  UniProtKB/Swiss-Prot ATPF_RHORT  H+-transporting two-sector ATPase, B/B' subunit
[B] Pelagibacter ubiquePELUB00118  UniProtKB/TrEMBL Q4FPE6  Old name Fo ATP Synthase Subunit b; old EC 3.6.1.34 H+-transporting two-sector ATPase (subunit b)
[B] Erythrobacter litoralis (strain HTCC2594)ERYLH01496  UniProtKB/Swiss-Prot ATPF_ERYLH  AtpF, ATP synthase F0, B subunit COG0711 F0F1-type ATP synthase, subunit b
[B] Novosphingobium aromaticivorans (strain DSM 12444)NOVAD01310  UniProtKB/TrEMBL Q2G8R0  H+-transporting two-sector ATPase, B/B' subunit
[B] Sphingopyxis alaskensisSPHAL01065  UniProtKB/Swiss-Prot ATPF_SPHAL  H+-transporting two-sector ATPase, B/B' subunit