List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 259548

nuclease
This group has 34 members: 34 [B]acteria
Fingerprint: IEPYKWR

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Prosthecochloris aestuarii (strain DSM 271 / SK 413)PROA201405  UniProtKB/TrEMBL B4S8T9  Nuclease
[B] Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)LEPCP02773  UniProtKB/TrEMBL B1XXE5  Nuclease (SNase domain protein) precursor
[B] Azoarcus sp. (strain EbN1)AZOSE04315  UniProtKB/TrEMBL Q5NX18  predicted staphylococcal nuclease homologue
[B] Desulfotalea psychrophilaDESPS02646  UniProtKB/TrEMBL Q6AJV0  related to nuclease
[B] Campylobacter jejuniCAMJE00916  UniProtKB/TrEMBL A3YNJ6  Putative secreted nuclease
[B] Campylobacter jejuni (strain RM1221)CAMJR01023  UniProtKB/TrEMBL Q5HUI1  identified by similarity to SP:P43270; match to protein family HMM PF00565 thermonuclease family protein
[B] Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)CAMJD00649  UniProtKB/TrEMBL A7H358  Thermonuclease family protein
[B] Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)CAMJJ00930  UniProtKB/TrEMBL A1VZW8  thermonuclease family protein identified by match to protein family HMM PF00565
[B] Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)CAMJ800912  UniProtKB/TrEMBL A8FM30  Thermonuclease family protein
[B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)CAMLR00529  UniProtKB/TrEMBL B9KFR2  Thermonuclease family protein
[B] Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)NITOC01375  UniProtKB/TrEMBL Q3JB45  Micrococcal nuclease (SNase-like)
[B] Escherichia coli (strain 55989 / EAEC)ECO5504850  UniProtKB/TrEMBL B7LWY5  Putative nuclease
[B] Escherichia coli (strain UTI89 / UPEC)ECOUT05189  UniProtKB/TrEMBL Q1R1P4  hypothetical protein
[B] Escherichia coli O157:H7ECO5705106  UniProtKB/Swiss-Prot YFI3_ECO57  98 pct identical and equal length to YFI3_ECOLI SW: Q99342 hypothetical protein 15.6 kDa protein in finO 3' region precursor
[B] Escherichia coli O157:H7 (strain EC4115 / EHEC)ECO5E05170  UniProtKB/TrEMBL B5YPH0  Nuclease homolog
[B] Escherichia coli O81 (strain ED1a)ECO8105079  UniProtKB/TrEMBL B7LIP6  Putative endonuclease
[B] Salmonella newport (strain SL254)SALNS04622  UniProtKB/TrEMBL A4IV96  Staphylococcal nuclease domain protein
[B] Salmonella paratyphi A (strain AKU_12601)SALPK04431  UniProtKB/TrEMBL A4V9J6  Putative nuclease
[B] Salmonella typhiSALTI04695  UniProtKB/TrEMBL Q935J7  Putative nuclease
[B] Shigella boydii serotype 4 (strain Sb227)SHIBS03809  UniProtKB/TrEMBL Q31SF6  conserved hypothetical protein
[B] Shigella sonnei (strain Ss046)SHISS03932  UniProtKB/TrEMBL Q3YTE3  conserved hypothetical protein
[B] Legionella pneumophila (strain Corby)LEGPC00219  UniProtKB/TrEMBL A5IA19  Putative endonuclease
[B] Actinobacillus pleuropneumoniae serotype 3 (strain JL03)ACTPJ01091  UniProtKB/TrEMBL B0BQ66  Putative endonuclease
[B] Actinobacillus pleuropneumoniae serotype 5b (strain L20)ACTP201104  UniProtKB/TrEMBL A3N1D0  Putative micrococcal nuclease (Thermonuclease)- like protein
[B] Actinobacillus pleuropneumoniae serotype 7 (strain AP76)ACTP701160  UniProtKB/TrEMBL B3GY13  Putative micrococcal nuclease (Thermonuclease)- like protein
[B] Haemophilus influenzaeHAEIN01270  UniProtKB/Swiss-Prot Y1296_HAEIN  Uncharacterized endonuclease HI1296
[B] Haemophilus influenzae (strain 86-028NP)HAEI801592  UniProtKB/TrEMBL Q4QK49  Similar to: HI1296, YC96_HAEIN predicted micrococcal nuclease-like protein
[B] Haemophilus influenzae (strain PittEE)HAEIE00742  UniProtKB/TrEMBL A5UBU8  7-cyano-7-deazaguanine reductase
[B] Haemophilus influenzae (strain PittGG)HAEIG00249  UniProtKB/TrEMBL A5UF22  Nuclease
[B] Haemophilus somnus (strain 129PT)HAES100968  UniProtKB/TrEMBL Q0I399  Hypothetical protein
[B] Haemophilus somnus (strain 2336)HAES201400  UniProtKB/TrEMBL B0UUG1  Nuclease (SNase domain protein) precursor
[B] Mannheimia succiniciproducens (strain MBEL55E)MANSM01269  UniProtKB/TrEMBL Q65T31  Micrococcal nuclease (thermonuclease) similarity Hypothetical protein
[B] Pseudomonas stutzeri (strain A1501)PSEU503979  UniProtKB/TrEMBL A4VRX1  Micrococcal nuclease
[B] Akkermansia muciniphila (strain ATCC BAA-835)AKKM800766  UniProtKB/TrEMBL B2UQ78  Nuclease (SNase domain protein) precursor