List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 110879

thioredoxin family protein
This group has 10 members: 10 [B]acteria
Fingerprint: GGVMGVP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Campylobacter concisus (strain 13826)CAMC100310  UniProtKB/TrEMBL A7ZBR3  Thioredoxin family protein
[B] Campylobacter curvus (strain 525.92)CAMC501626  UniProtKB/TrEMBL A7H0E1  Thioredoxin family protein
[B] Campylobacter fetus subsp. fetus (strain 82-40)CAMFF00508  UniProtKB/TrEMBL A0RND7  conserved hypothetical protein
[B] Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)CAMHC00418  UniProtKB/TrEMBL A7I0J9  Redoxin superfamily
[B] Campylobacter jejuniCAMJE01579  UniProtKB/TrEMBL A3YK03  Putative lipoprotein thiredoxin
[B] Campylobacter jejuni (strain RM1221)CAMJR01772  UniProtKB/TrEMBL Q5HSC8  thioredoxin family protein
[B] Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)CAMJD01646  UniProtKB/TrEMBL A7H610  Thioredoxin family protein
[B] Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)CAMJ801559  UniProtKB/TrEMBL A8FNX7  Possible lipoprotein thioredoxin
[B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)CAMLR01117  UniProtKB/TrEMBL B9KD46  Putative uncharacterized protein
[B] Wolinella succinogenesWOLSU01409  UniProtKB/TrEMBL Q7MR95  hypothetical protein