List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 234871

putative chorismate--pyruvate lyase
This group has 14 members: 14 [B]acteria
Fingerprint: PVVFAHS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Nitrosomonas europaeaNITEU01784  UniProtKB/Swiss-Prot UBIC_NITEU  putative chorismate--pyruvate lyase
[B] Nitrosomonas eutropha (strain C71)NITEC01063   ABI59384.1  Chorismate lyase PFAM: Chorismate lyase KEGG: neu:NE1837 putative chorismate--pyruvate lyase
[B] Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)NITMU02508  UniProtKB/Swiss-Prot UBIC_NITMU  Chorismate lyase
[B] Alkalilimnicola ehrlichei (strain MLHE-1)ALHEH02417  UniProtKB/Swiss-Prot UBIC_ALHEH  Chorismate lyase
[B] Coxiella burnetiiCOXBU00049  UniProtKB/Swiss-Prot UBIC_COXBU  similar to GP:9885819, and SP:P26602; identified by sequence similarity; putative chorismate--pyruvate lyase, putative
[B] Coxiella burnetii (strain CbuG_Q212)COXB201698  UniProtKB/TrEMBL B6J376  Chorismate--pyruvate lyase
[B] Coxiella burnetii (strain Dugway 5J108-111)COXBN01903  UniProtKB/TrEMBL A9KGW8  Putative chorismate--pyruvate lyase
[B] Coxiella burnetii (strain RSA 331 / Henzerling II)COXBR00126  UniProtKB/TrEMBL A9N9X1  Putative chorismate--pyruvate lyase
[B] Methylococcus capsulatusMETCA01242  UniProtKB/Swiss-Prot UBIC_METCA  identified by similarity to SP:P26602; match to protein family HMM PF04345 chorismate--pyruvate lyase, putative
[B] Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573)ALCBS00164  UniProtKB/Swiss-Prot UBIC_ALCBS  Chorismate lyase, putative
[B] Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)CHRSD03230  UniProtKB/Swiss-Prot UBIC_CHRSD  Chorismate lyase
[B] Marinomonas sp. (strain MWYL1)MARMS04326  UniProtKB/TrEMBL A6W3L4  Chorismate lyase
[B] Pseudomonas syringae (pv. tomato)PSESM05165  UniProtKB/Swiss-Prot UBIC_PSESM  chorismate-pyruvate lyase, putative
[B] Pseudomonas syringae pv. syringae (strain B728a)PSEU205009  UniProtKB/Swiss-Prot UBIC_PSEU2  Chorismate lyase