List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 55576
putative serine protease precursor
This group has 10 members: 2 [E]ukaryota 8 [B]acteria
Fingerprint: PVNEILS
| [E] Phaeosphaeria nodorum | PHANO06399 | Q0V2B5 | hypothetical protein |
| [E] Magnaporthe grisea | MAGGR05650 | A4RGJ7 | Magnaporthe grisea hypothetical protein |
| [B] Rhodococcus opacus (strain B4) | RHOOB05543 | C1AWM2 | Putative S1E family peptidase |
| [B] Rhodococcus sp. (strain RHA1) | RHOSR05397 | Q0S5C4 | Possible protease |
| [B] Salinispora arenicola (strain CNS-205) | SALAI03005 | A8M8D2 | Ricin B lectin |
| [B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) | SALTO02884 | A4XDP8 | Ricin B lectin |
| [B] Saccharopolyspora erythraea (strain NRRL 23338) | SACEN00490 | A4F726 | Serine protease |
| [B] Streptomyces coelicolor | STRCO04640 | Q9L0J5 | SCD840A.16c, probable serine protease precursor, len: 463 aa; similar to SW:PRTC_STRGR (EMBL:L29018) Streptomyces griseus serine protease C precursor (EC 3.4.21.-) SprC, 457 aa; fasta scores: opt: 1761 z-score: 1679.7 E(): 0; 59.4% identity in 458 aa overlap and to TR:Q9XA96 (EMBL:AL096837) Streptomyces coelicolor putative serine protease SCF43A.19, 458 aa; fasta scores: opt: 1637 z-score: 1264.0 E(): 0; 55.9% identity in 460 aa overlap. Contains Pfam match to entry PF00089 trypsin, Trypsin and matches to Prosite entries PS00135 Serine proteases, trypsin family, serine active site and PS00178 Aminoacyl-transfer RNA synthetases class-I signature. Contains also possible N-terminal region signal peptide sequence putative serine protease precursor |
| [B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) | STRGG03933 | B1VSD5 | Secreted serine protease |
| [B] Thermobifida fusca (strain YX) | THEFY00482 | Q47SP5 | putative serine protease precursor |