List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 55576

putative serine protease precursor
This group has 10 members: 2 [E]ukaryota 8 [B]acteria
Fingerprint: PVNEILS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Phaeosphaeria nodorumPHANO06399  UniProtKB/TrEMBL Q0V2B5  hypothetical protein
[E] Magnaporthe griseaMAGGR05650  UniProtKB/TrEMBL A4RGJ7  Magnaporthe grisea hypothetical protein
[B] Rhodococcus opacus (strain B4)RHOOB05543  UniProtKB/TrEMBL C1AWM2  Putative S1E family peptidase
[B] Rhodococcus sp. (strain RHA1)RHOSR05397  UniProtKB/TrEMBL Q0S5C4  Possible protease
[B] Salinispora arenicola (strain CNS-205)SALAI03005  UniProtKB/TrEMBL A8M8D2  Ricin B lectin
[B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO02884  UniProtKB/TrEMBL A4XDP8  Ricin B lectin
[B] Saccharopolyspora erythraea (strain NRRL 23338)SACEN00490  UniProtKB/TrEMBL A4F726  Serine protease
[B] Streptomyces coelicolorSTRCO04640  UniProtKB/TrEMBL Q9L0J5  SCD840A.16c, probable serine protease precursor, len: 463 aa; similar to SW:PRTC_STRGR (EMBL:L29018) Streptomyces griseus serine protease C precursor (EC 3.4.21.-) SprC, 457 aa; fasta scores: opt: 1761 z-score: 1679.7 E(): 0; 59.4% identity in 458 aa overlap and to TR:Q9XA96 (EMBL:AL096837) Streptomyces coelicolor putative serine protease SCF43A.19, 458 aa; fasta scores: opt: 1637 z-score: 1264.0 E(): 0; 55.9% identity in 460 aa overlap. Contains Pfam match to entry PF00089 trypsin, Trypsin and matches to Prosite entries PS00135 Serine proteases, trypsin family, serine active site and PS00178 Aminoacyl-transfer RNA synthetases class-I signature. Contains also possible N-terminal region signal peptide sequence putative serine protease precursor
[B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG03933  UniProtKB/TrEMBL B1VSD5  Secreted serine protease
[B] Thermobifida fusca (strain YX)THEFY00482  UniProtKB/TrEMBL Q47SP5  putative serine protease precursor