List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 38029

A synthetase
This group has 17 members: 14 [E]ukaryota 3 [B]acteria
Fingerprint: VIDTYWQ

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Xenopus tropicalisXENTR10242  Ensembl ENSXETP00000009352   -
[E] Oryzias latipesORYLA06337  Ensembl ENSORLP00000004940   -
[E] Gasterosteus aculeatusGASAC02166  Ensembl ENSGACP00000021975   -
[E] Takifugu rubripesFUGRU08532  Ensembl ENSTRUP00000020905   -
[E] Pristionchus pacificusPRIPA02488   WBGene00092060  status:Predicted
[E] Caenorhabditis brenneriCAEBI19930   WBGene00159547  locus:Cbn-acs-19
[E] Caenorhabditis briggsaeCAEBR03594  UniProtKB/TrEMBL A8WVG3  
[E] Trypanosoma bruceiTRYBB02886   AAX69719.1  go_component: integral to membrane [goid 0016021]; go_function: catalytic activity [goid 0003824]; go_process: metabolism [goid 0008152] acetyl-CoA synthetase, putative
[E] Phaeosphaeria nodorumPHANO06702  UniProtKB/TrEMBL Q0TY12  predicted protein
[E] Ashbya gossypiiASHGO01784  UniProtKB/Swiss-Prot ACS1_ASHGO  Syntenic homolog of Saccharomyces cerevisiae YAL054C (ACS1) ADR408Wp
[E] Lodderomyces elongisporusLODEL02481  UniProtKB/TrEMBL A5DYQ3  Lodderomyces elongisporus (LELG_02490.1) acetyl-coenzyme A synthetase 1 (translation)
[E] Saccharomyces cerevisiaeYEAST05616  UniProtKB/Swiss-Prot ACS1_YEAST  Acetyl-coenzyme A synthetase 1
[E] Cryptococcus neoformansCRYNE00733  UniProtKB/TrEMBL Q5KN48  go_component: cytosol [goid 0005829]; go_function: acetate-CoA ligase activity [goid 0003987]; go_process: acetyl-CoA biosynthesis [goid 0006085] acetate--CoA ligase, putative
[E] Encephalitozoon cuniculiENCCU00623  UniProtKB/TrEMBL Q8SRZ9  ACETYLCOENZYME A SYNTHETASE;05_0310, ACETYLCOENZYME A SYNTHETASE, ACS1_yeast, gene found by Glimmer;
[B] Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)SYNFM00734  UniProtKB/Swiss-Prot ACSA_SYNFM  acetate--CoA ligase TIGRFAM: acetate--CoA ligase PFAM: AMP-dependent synthetase and ligase KEGG: sat:SYN_01223 acetyl-CoA synthetase
[B] Colwellia psychrerythraea (strain 34H / ATCC BAA-681)COLP303792  UniProtKB/TrEMBL Q47X57  identified by similarity to SP:P27550; match to protein family HMM PF00501; match to protein family HMM TIGR02188 acetyl-CoA synthetase
[B] Pseudomonas aeruginosa (strain PA7)PSEA705338  UniProtKB/TrEMBL A6VCI9  Acetate--CoA ligase