List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 54705

hypothetical protein
This group has 8 members: 3 [E]ukaryota 5 [B]acteria
Fingerprint: PGWNLGN

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Phaeosphaeria nodorumPHANO03489   SNU00770.1  hypothetical protein
[E] Aspergillus fumigatusASPFU04973  UniProtKB/TrEMBL Q4WE56  extracellular endoglucanase, putative
[E] Botrytis cinereaBOTFB09623  UniProtKB/TrEMBL A6S5G5  Botrytis cinerea hypothetical protein
[B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT601407  UniProtKB/TrEMBL B5YFI6  Endoglucanase B
[B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD01517  UniProtKB/TrEMBL B8E2L5  Cellulase
[B] Bacillus haloduransBACHD00593  UniProtKB/TrEMBL Q9KF82  endo-beta-1,4-glucanase (celulase B)
[B] Bacillus licheniformis (strain DSM 13 / ATCC 14580)BACLD01768  UniProtKB/TrEMBL Q65JI7  InterProMatches:IPR001547,GH5A; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolism (GO:0005975) Glycoside Hydrolase Family 5
[B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)CLOPH03154  UniProtKB/TrEMBL A9KRR2  Cellulase precursor