List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
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The close groups are made of the set of all
groups that are linked by at least one pair
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Note that not all pairs of proteins coming
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were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
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proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
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OMA fingerprint
The fingerprint is a subsequence that is specific to a
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Since the group number is specific to a release, this
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OMA

Keyword Protein Sequence Group Entry

OMA Group 216532

d lytic murein transglycosylase D
This group has 19 members: 19 [B]acteria
Fingerprint: PFVESAY

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)PARD802463  UniProtKB/TrEMBL A6LF11  Glycoside hydrolase family 23
[B] Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)CYTH300026  UniProtKB/TrEMBL Q11Z46  peptidoglycan-binding lytic transglycosylase
[B] Prosthecochloris vibrioformis (strain DSM 265)PROVI00765  UniProtKB/TrEMBL A4SE88  Lytic transglycosylase, catalytic PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic KEGG: plt:Plut_1174 peptidoglycan-binding LysM
[B] Pelodictyon luteolum (strain DSM 273)PELLD01136  UniProtKB/TrEMBL Q3B3P5  Peptidoglycan-binding LysM
[B] Bordetella avium (strain 197N)BORA102917  UniProtKB/TrEMBL Q2KV52  membrane-bound lytic murein transglycosylase D
[B] Bordetella bronchisepticaBORBR04240  UniProtKB/TrEMBL Q7WFJ1  ortholog of Bordetella pertussis (BX470248) BP3214 putative membrane-bound lytic murein transglycosylase D precursor
[B] Bordetella parapertussisBORPA03782  UniProtKB/TrEMBL Q7W434  ortholog of Bordetella pertussis (BX470248) BP3214; putative membrane-bound precursor protein putative membrane-bound lytic murein transglycosylase D precursor
[B] Bordetella pertussisBORPE02941  UniProtKB/TrEMBL Q7VUA4  Similar to Escherichia coli membrane-bound lytic murein transglycosylase D precursor MltD or DniR or B0211 SW:MLTD_ECOLI (P23931) (452 aa) fasta scores: E(): 2.4e-29, 32.05% id in 443 aa, and to Pseudomonas aeruginosa membrane-bound lytic murein transglycosylase d precursor MltD or Pa1812 TR:Q9I2T2 (EMBL:AE004607) (534 aa) fasta scores: E(): 1.1e-47, 38.84% id in 484 aa; putative membrane-bound precursor protein putative membrane-bound lytic murein transglycosylase D precursor
[B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD00616  UniProtKB/TrEMBL A9I476  Membrane-bound lytic murein transglycosylase D
[B] Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)GEOBB00466  UniProtKB/TrEMBL B5EBN2  Lytic transglycosylase catalytic protein
[B] Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)GEOMG02470  UniProtKB/TrEMBL Q39SJ9  Peptidoglycan-binding LysM:Lytic transglycosylase, catalytic
[B] Geobacter uraniumreducens (strain Rf4)GEOUR03836  UniProtKB/TrEMBL A5G8N6  Lytic transglycosylase, catalytic precursor
[B] Anaeromyxobacter dehalogenans (strain 2CP-C)ANADE03775  UniProtKB/TrEMBL Q2IG50  peptidoglycan-binding lytic transglycosylase
[B] Anaeromyxobacter sp. (strain Fw109-5)ANADF03862  UniProtKB/TrEMBL A7HH91  Lytic transglycosylase catalytic
[B] Anaeromyxobacter sp. (strain K)ANASK03804  UniProtKB/TrEMBL B4UEU0  Lytic transglycosylase catalytic
[B] Shewanella frigidimarina (strain NCIMB 400)SHEFN01951  UniProtKB/TrEMBL Q082I1  Lytic transglycosylase, catalytic precursor
[B] Pseudomonas mendocina (strain ymp)PSEMY02028  UniProtKB/TrEMBL A4XU08  Lytic transglycosylase, catalytic
[B] Pseudomonas putida (strain F1 / ATCC 700007)PSEP101695  UniProtKB/TrEMBL A5W166  MLTD_N domain protein precursor
[B] Pseudomonas putida (strain KT2440)PSEPK04064  UniProtKB/TrEMBL Q88FF2  identified by match to PFAM protein family HMM PF01464 membrane-bound lytic murein transglycosylase D