List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 56371

aminotransferase
This group has 18 members: 18 [B]acteria
Fingerprint: PEEVSHG

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Mycobacterium avium (strain 104)MYCA102001  UniProtKB/TrEMBL A0QEK4  transferase identified by match to protein family HMM PF00155
[B] Mycobacterium paratuberculosisMYCPA02036  UniProtKB/TrEMBL Q73YA1  hypothetical protein
[B] Mycobacterium lepraeMYCLE01786  UniProtKB/Swiss-Prot CBL_MYCLE  Similar to M. tuberculosis predicted aminotransferase Rv2294 SW:YM94_MYCTU (Q50672) (407 aa); Fasta score E(): 0, 76.5% identity in 404 aa overlap, and to many others e.g. Escherichia coli MalY protein SW:MALY_ECOLI (P23256) (390 aa); Fasta score E(): 5.8e-27, 31.2% identity in 385 aa overlap. Similar to and ML2502 aminotransferase
[B] Mycobacterium leprae (strain Br4923)MYCLB01775  UniProtKB/TrEMBL B8ZS70  Aminotransferase
[B] Mycobacterium marinum (strain ATCC BAA-535 / M)MYCMM03380  UniProtKB/TrEMBL B2HIX1  Aminotransferase
[B] Mycobacterium ulcerans (strain Agy99)MYCUA02231  UniProtKB/TrEMBL A0PRS1  aminotransferase cytoplasmic protein
[B] Rhodococcus sp. (strain RHA1)RHOSR08031  UniProtKB/TrEMBL Q0RXQ7  Probable aminotransferase
[B] Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)CLAM300194  UniProtKB/TrEMBL A5CMB9  Putative aminotransferase
[B] Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667)CLAMS00338  UniProtKB/TrEMBL B0RBS1  Putative aminotransferase
[B] Kocuria rhizophila (strain ATCC 9341 / NBRC 12708 / DC2201)KOCRD01511  UniProtKB/TrEMBL B2GK17  Aminotransferase
[B] Salinispora arenicola (strain CNS-205)SALAI02674  UniProtKB/TrEMBL A8M5Q1  Aminotransferase class I and II
[B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO02537  UniProtKB/TrEMBL A4X830  Aminotransferase, class I and II
[B] Streptomyces coelicolorSTRCO00715  UniProtKB/TrEMBL Q9EWU0  3SC5B7.09c, probable transferase, len: 444 aa; similar to SW:MALY_ECOLI (EMBL:M60722) Escherichia coli aminotransferase MalY protein, 390 aa; fasta scores: opt: 522 z-score: 589.7 E(): 2.5e-25; 30.8% identity in 370 aa overlap putative transferase
[B] Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083)BIFAA01167  UniProtKB/TrEMBL A1A2L8  probable aminotransferase COG family: PLP-dependent aminotransferase Orthologue of BL1268 PFAM_ID: aminotran_1_2
[B] Bifidobacterium longumBIFLO01422  UniProtKB/TrEMBL Q8G4V6  Probable aminotransferase
[B] Bifidobacterium longum (strain DJO10A)BIFLD01582  UniProtKB/TrEMBL B3DPI7  Bifunctional PLP-dependent enzyme
[B] Lysinibacillus sphaericus (strain C3-41)LYSSC00591  UniProtKB/TrEMBL B1HXE2  Aminotransferase
[B] Pseudomonas fluorescens (strain PfO-1)PSEPF02686  UniProtKB/TrEMBL Q3KCR8  Aminotransferase, class I and II