List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 110636

class I and I
This group has 6 members: 6 [B]acteria
Fingerprint: NNPTGPR

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Synechococcus sp. (strain JA-3-3Ab)SYNJA01757  UniProtKB/Swiss-Prot HIS8_SYNJA  histidinol-phosphate aminotransferase identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141
[B] Trichodesmium erythraeum (strain IMS101)TRIEI04012  UniProtKB/Swiss-Prot HIS8_TRIEI  Aminotransferase, class I and II
[B] Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)EXIS202317  UniProtKB/TrEMBL B1YL13  Aminotransferase class I and II
[B] Desulfotomaculum reducens (strain MI-1)DESRM02254  UniProtKB/TrEMBL A4J711  Histidinol phosphate aminotransferase
[B] Chromobacterium violaceumCHRVO00613  UniProtKB/Swiss-Prot HIS8_CHRVO  identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0079 histidinol-phosphate aminotransferase
[B] Laribacter hongkongensis (strain HLHK9)LARHH00185  UniProtKB/TrEMBL C1DAK0  His8