List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 267507

Ketoisovalerate oxidoreductase subunit vorB
This group has 8 members: 5 [A]rchaea 3 [B]acteria
Fingerprint: PACCSTI

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Pyrococcus abyssiPYRAB01362  UniProtKB/Swiss-Prot VORB_PYRAB  Ketoisovalerate oxidoreductase subunit vorB
[A] Pyrococcus furiosusPYRFU00956  UniProtKB/Swiss-Prot VORB_PYRFU  Ketoisovalerate oxidoreductase subunit vorB
[A] Pyrococcus horikoshiiPYRHO00713  UniProtKB/Swiss-Prot VORB_PYRHO  Ketoisovalerate oxidoreductase subunit vorB
[A] Thermococcus kodakaraensisPYRKO01975  UniProtKB/TrEMBL Q5JIJ9  2-oxoisovalerate:ferredoxin oxidoreductase, beta subunit
[A] Thermococcus onnurineus (strain NA1)THEON01486  UniProtKB/TrEMBL B6YY06  2-ketovalerate ferredoxin oxidoreductase beta-2
[B] Syntrophomonas wolfei subsp. wolfei (strain Goettingen)SYNWW02134  UniProtKB/TrEMBL Q0AUS9  2-ketoacid ferredoxin oxidoreductase beta subunit
[B] Rhodopseudomonas palustris (strain BisB5)RHOPS01507  UniProtKB/TrEMBL Q13AY8  thiamine pyrophosphate enzyme-like TPP-binding
[B] Azoarcus sp. (strain EbN1)AZOSE02988  UniProtKB/TrEMBL Q5P0H3  phenylglyoxylate:acceptor oxidoreductase