List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.

Keyword Protein Sequence Group Entry

OMA Group 114321

actin alpha 1 skeletal muscle
This group has 41 members: 41 [E]ukaryota
Fingerprint: ILMETGM

Protein List | Alignment | Close Groups | Ontology Download: download fasta, download darwin

[E] Homo sapiensHUMAN02523  UniProtKB/Swiss-Prot ACTS_HUMAN  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Pan troglodytesPANTR03904  UniProtKB/TrEMBL H2Q1A9  
[E] Nomascus leucogenysNOMLE07155  UniProtKB/TrEMBL G1RW15  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Macaca mulattaMACMU02564  UniProtKB/TrEMBL F7HM15  Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F7HM15]
[E] Callithrix jacchusCALJA09607  UniProtKB/TrEMBL F7FWZ0  Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F7FWZ0]
[E] Microcebus murinusMICMU04129  Ensembl ENSMICP00000006782  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Otolemur garnettiiOTOGA11037  UniProtKB/TrEMBL H0XEG0  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Ochotona princepsOCHPR00361  Ensembl ENSOPRP00000002623  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Cavia porcellusCAVPO12312  UniProtKB/TrEMBL H0VGS3  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Mus musculusMOUSE22871  UniProtKB/Swiss-Prot ACTS_MOUSE  actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
[E] Rattus norvegicusRATNO10603  UniProtKB/Swiss-Prot ACTS_RAT  Actin, alpha skeletal muscle [Source:UniProtKB/Swiss-Prot;Acc:P68136]
[E] Spermophilus tridecemlineatusSPETR18342  UniProtKB/TrEMBL I3N266  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Loxodonta africanaLOXAF09626  UniProtKB/TrEMBL G3SXX7  Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G3SXX7]
[E] Tursiops truncatusTURTR03326  Ensembl ENSTTRP00000009090  
[E] Bos taurusBOVIN12691  UniProtKB/Swiss-Prot ACTS_BOVIN  Actin, alpha skeletal muscle [Source:UniProtKB/Swiss-Prot;Acc:P68138]
[E] Sus scrofaPIGXX03372  UniProtKB/Swiss-Prot ACTS_PIG  Actin, alpha skeletal muscle [Source:UniProtKB/Swiss-Prot;Acc:P68137]
[E] Pteropus vampyrusPTEVA03000  Ensembl ENSPVAP00000011835  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Erinaceus europaeusERIEU04378  Ensembl ENSEEUP00000013831  
[E] Equus caballusHORSE00519  UniProtKB/TrEMBL F7CZ92  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Sarcophilus harrisiiSARHA02160  UniProtKB/TrEMBL G3WM41  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Ornithorhynchus anatinusORNAN14894  Ensembl ENSOANP00000019812   -
[E] Anas platyrhynchosANAPL00737  UniProtKB/TrEMBL U3IP16  actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:143]
[E] Ficedula albicollisFICAL12957  UniProtKB/TrEMBL U3JL42  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Anolis carolinensisANOCA01647  UniProtKB/TrEMBL L7MZF2  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Pelodiscus sinensisPELSI11070  UniProtKB/TrEMBL K7F4I9  actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129]
[E] Latimeria chalumnaeLATCH15445  UniProtKB/TrEMBL H3B1I5  nucleoporin 133kDa [Source:HGNC Symbol;Acc:18016]
[E] Oreochromis niloticusORENI16815  UniProtKB/TrEMBL I3KK81  
[E] Xiphophorus maculatusXIPMA10036  UniProtKB/TrEMBL M3ZXD4  
[E] Gasterosteus aculeatusGASAC07047  UniProtKB/TrEMBL G3NXX5  
[E] Takifugu rubripesTAKRU18774  UniProtKB/Swiss-Prot ACTC_TAKRU  Actin, alpha cardiac [Source:UniProtKB/Swiss- Prot;Acc:P53480]
[E] Gadus morhuaGADMO04111  Ensembl ENSGMOP00000001484  
[E] Danio rerioDANRE01007  UniProtKB/TrEMBL F1QUN8  actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
[E] Ciona intestinalisCIOIN11931  UniProtKB/TrEMBL F6SDC9  Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6SDC9]
[E] Ciona savignyiCIOSA07506  UniProtKB/Swiss-Prot ACTM_CIOSA  Actin, muscle [Source:UniProtKB/Swiss- Prot;Acc:O15998]
[E] Trypanosoma brucei brucei (strain 927/4 GUTat10.1)TRYB202141  UniProtKB/TrEMBL Q38E94  similar to SP:P12432: Actin A. {Trypanosoma brucei brucei;} PMID:3386635; go_component: cytoplasm [goid 0005737]; go_component: actin cytoskeleton [goid 0015629]; go_function: structural constituent of cytoskeleton [goid 0005200]; go_process: cytoskeleton organization and biogenesis [goid 0007010] actin A
[E] Zea maysMAIZE49638  UniProtKB/TrEMBL B4FRH8  LOC100283878 [Source:RefSeq peptide;Acc:NP_001150248]
[E] Musa acuminataMUSAC33667   GSMUA_AchrUn_randomP01440_001  Actin [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01440_001]
[E] Solanum lycopersicumSOLLC07025  UniProtKB/TrEMBL K4D4E6  Actin-51 [Source:UniProtKB/Swiss-Prot;Acc:Q96483]
[E] Glycine maxSOYBN25371  UniProtKB/TrEMBL I1K4W1  Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P02580]
[E] Arabidopsis lyrataARALY27882   fgenesh2_kg.6__937__AT5G09810.1  
[E] Arabidopsis thalianaARATH14961  UniProtKB/Swiss-Prot ACT7_ARATH  actin 7 [Source:TAIR_LOCUS;Acc:AT5G09810]

Internal infos: group_nr=114321; pid=17614, generation_time=0.016