List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 121731

flagellar motor switch protein FliN
This group has 6 members: 6 [B]acteria
Fingerprint: NTIDIVD

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)PARL102117  UniProtKB/TrEMBL A7HV62  Flagellar motor switch protein FliN
[B] Rhodospirillum centenum (strain ATCC 51521 / SW)RHOCS00766  UniProtKB/TrEMBL B6IRY8  Flagellar motor switch protein FliN
[B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)CAMLR00166  UniProtKB/TrEMBL B9KEP9  Flagellar motor switch protein FliN
[B] Buchnera aphidicola (subsp. Acyrthosiphon pisum)BUCAI00073  UniProtKB/Swiss-Prot FLIN_BUCAI  flagellar motor switch protein FliN
[B] Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A)BUCA500070  UniProtKB/TrEMBL B8D8N5  Flagellar motor switch protein FliN
[B] Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)BUCAT00070  UniProtKB/TrEMBL B8D6Y9  Flagellar motor switch protein FliN