| [B] Corynebacterium glutamicum | CORGL00772 | DNAA_CORGL | Chromosomal replication initiator protein dnaA |
| [B] Corynebacterium glutamicum (strain R) | CORGB00001 | DNAA_CORGB | Hypothetical protein |
| [B] Mycobacterium avium (strain 104) | MYCA100001 | A0Q8R6 | chromosomal replication initiator protein DnaA identified by match to protein family HMM PF00308; match to protein family HMM TIGR00362 |
| [B] Mycobacterium paratuberculosis | MYCPA00001 | DNAA_MYCPA | DnaA |
| [B] Mycobacterium gilvum (strain PYR-GCK) | MYCGI00763 | A4T4T8 | chromosomal replication initiator protein DnaA KEGG: mva:Mvan_0001 chromosomal replication initiator protein DnaA TIGRFAM: chromosomal replication initiator protein DnaA PFAM: Chromosomal replication initiator, DnaA C-terminal domain; Chromosomal replication initiator, DnaA SMART: AAA ATPase |
| [B] Mycobacterium marinum (strain ATCC BAA-535 / M) | MYCMM00001 | DNAA_MYCMM | Chromosomal replication initiator protein DnaA |
| [B] Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | MYCS206593 | DNAA_MYCS2 | Chromosomal replication initiator protein DnaA |
| [B] Mycobacterium sp. (strain JLS) | MYCSJ00001 | DNAA_MYCSJ | chromosomal replication initiator protein DnaA KEGG: mmc:Mmcs_0001 chromosomal replication initiator protein DnaA TIGRFAM: chromosomal replication initiator protein DnaA PFAM: Chromosomal replication initiator, DnaA C-terminal domain; Chromosomal replication initiator, DnaA SMART: AAA ATPase |
| [B] Mycobacterium sp. (strain KMS) | MYCSK00009 | DNAA_MYCSK | chromosomal replication initiator protein DnaA KEGG: mmc:Mmcs_0001 chromosomal replication initiator protein DnaA TIGRFAM: chromosomal replication initiator protein DnaA PFAM: Chromosomal replication initiator, DnaA C-terminal domain; Chromosomal replication initiator, DnaA SMART: AAA ATPase |
| [B] Mycobacterium sp. (strain MCS) | MYCSS00001 | DNAA_MYCSS | Chromosomal replication initiator protein DnaA |
| [B] Mycobacterium bovis | MYCBO00001 | DNAA_MYCBO | Mb0001, dnaA, len: 507 aa. Equivalent to Rv0001, len: 507 aa, from Mycobacterium tuberculosis strain H37Rv, (99.6% identity in 507 aa overlap). dnaA, chromosomal replication initiator protein (see citations below), equivalent to other Mycobacterial CHROMOSOMAL REPLICATION INITIATOR PROTEINS e.g. P46388|DNAA_MYCLE from Mycobacterium leprae (502 aa); Q9L7L7|DNAA_MYCPA from Mycobacterium paratuberculosis (509 aa); P49990|DNAA_MYCAV from Mycobacterium avium (508 aa); P49992|DNAA_MYCSM from Mycobacterium smegmatis (504 aa); etc. Also highly similar to others except in N-terminus e.g. Q9ZH75|DNAA_STRCH CHROMOSOMAL REPLICATION INITIATOR PROTEIN from Streptomyces chrysomallus (624 aa); Q9ZH76|DNAA_STRRE from Streptomyces reticuli (643 aa); DNAA_ECOLI|P03004|B3702 chromosomal replication initiator protein from Escherichia coli strain K12 (467 aa), FASTA scores: opt: 986, E(): 0, (43.2% identity in 389 aa overlap); etc. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and PS01008 DnaA protein signature. BELONGS TO THE DNAA FAMILY. Note that the first base of this gene has been taken as base 1 of the Mycobacterium bovis genomic sequence. CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA |
| [B] Mycobacterium bovis (strain BCG / Paris 1173P2) | MYCBP00003 | A1KEE2 | Chromosomal replication initiation protein dnaA |
| [B] Mycobacterium tuberculosis | MYCTU01275 | DNAA_MYCTU | Chromosomal replication initiator protein dnaA |
| [B] Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) | MYCTA00001 | DNAA_MYCTA | Chromosomal replication initiation protein |
| [B] Mycobacterium tuberculosis (strain F11) | MYCTF00001 | A5WI55 | chromosomal replication initiator protein dnaA Mapped to H37Rv Rv0001 |
| [B] Mycobacterium ulcerans (strain Agy99) | MYCUA00001 | DNAA_MYCUA | chromosomal replication initiator protein DnaA Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (2D-LC-MS/MS) membrane protein Plays a critical role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (DnaA box): 5'-TTATC(C/A)A(C/A)A-3'. DnaA binds to ATP and to acidic phospholipids. DnaA protein binds the origin of replication (oriC), ATP and ADP, and exhibits weak ATPase activity. |
| [B] Leifsonia xyli (subsp. xyli) | LEIXX00001 | DNAA_LEIXX | identified by sequence similarity chromosomal replication initiator protein |
| [B] Arthrobacter aurescens (strain TC1) | ARTAT00001 | A1R0S2 | Chromosomal replication initiator protein DnaA |
| [B] Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) | ARTCA00001 | B8H7C8 | Chromosomal replication initiator protein dnaA |
| [B] Arthrobacter sp. (strain FB24) | ARTS200001 | A0JQT2 | chromosomal replication initiator protein DnaA KEGG: lxx:Lxx00010 chromosomal replication initiator protein TIGRFAM: chromosomal replication initiator protein DnaA PFAM: Chromosomal replication initiator, DnaA C-terminal domain; Chromosomal replication initiator, DnaA SMART: AAA ATPase |
| [B] Propionibacterium acnes | PROAC00001 | DNAA_PROAC | chromosomal replication initiator protein DnaA |
| [B] Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) | BIFAA00001 | A0ZZ99 | chromosomal replication initiator protein DnaA COG family: ATPase involved in DNA replication initiation Orthologue of BL0640 PFAM_ID: AAA PFAM_ID: bac_DNAA |
| [B] Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) | RUBXD00001 | Q1B046 | chromosomal replication initiator protein DnaA KEGG: chy:CHY_2710 chromosomal replication initiation protein TIGRFAM: chromosomal replication initiator protein DnaA PFAM: Chromosomal replication initiator, DnaA-like Chromosomal replication initiator, DnaA SMART: ATPase |
| [B] Chlorobium chlorochromatii (strain CaD3) | CHLCH00001 | Q3AUF1 | chromosomal replication initiator protein, DnaA |
| [B] Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) | LEPCP00001 | DNAA_LEPCP | Chromosomal replication initiator protein DnaA |
| [B] Helicobacter hepaticus | HELHP01106 | DNAA_HELHP | chromosomal replication initiator protein DnaA |
| [B] Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) | AERHH00001 | DNAA_AERHH | chromosomal replication initiator protein DnaA identified by match to protein family HMM PF00308; match to protein family HMM TIGR00362 |
| [B] Aeromonas salmonicida (strain A449) | AERS400001 | DNAA_AERS4 | Chromosomal replication initiator protein DnaA |
| [B] Pseudoalteromonas atlantica (strain T6c / BAA-1087) | PSEA600001 | Q15ZZ7 | Chromosomal replication initiator protein DnaA |
| [B] Shewanella frigidimarina (strain NCIMB 400) | SHEFN00001 | DNAA_SHEFN | Chromosomal replication initiator protein DnaA |
| [B] Shewanella oneidensis | SHEON00008 | DNAA_SHEON | Chromosomal replication initiator protein dnaA |
| [B] Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) | SHEPC00001 | DNAA_SHEPC | Chromosomal replication initiator protein DnaA |
| [B] Shewanella sp. (strain ANA-3) | SHESA00009 | DNAA_SHESA | chromosomal replication initiator protein DnaA KEGG: son:SO0008 chromosomal replication initiator protein DnaA TIGRFAM: chromosomal replication initiator protein DnaA PFAM: Chromosomal replication initiator, DnaA C-terminal; Chromosomal replication initiator, DnaA SMART: AAA ATPase |
| [B] Shewanella sp. (strain MR-4) | SHESM00001 | DNAA_SHESM | Chromosomal replication initiator protein DnaA |
| [B] Shewanella sp. (strain MR-7) | SHESR00001 | DNAA_SHESR | Chromosomal replication initiator protein DnaA |
| [B] Shewanella sp. (strain W3-18-1) | SHESW00001 | DNAA_SHESW | chromosomal replication initiator protein DnaA KEGG: shm:Shewmr7_0001 chromosomal replication initiator protein DnaA TIGRFAM: chromosomal replication initiator protein DnaA PFAM: Chromosomal replication initiator, DnaA C-terminal domain; Chromosomal replication initiator, DnaA SMART: AAA ATPase |
| [B] Buchnera aphidicola (subsp. Acyrthosiphon pisum) | BUCAI00012 | DNAA_BUCAI | chromosomal replication initiator protein DnaA |
| [B] Buchnera aphidicola (subsp. Schizaphis graminum) | BUCAP00012 | DNAA_BUCAP | chromosomal replication initiator protein |
| [B] Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) | BUCA500012 | DNAA_BUCA5 | Chromosomal replication initiator protein dnaA |
| [B] Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) | BUCAT00012 | DNAA_BUCAT | Chromosomal replication initiator protein dnaA |
| [B] Buchnera aphidicola subsp. Cinara cedri | BUCCC00004 | DNAA_BUCCC | chromosomal replication initiator protein COG_category L;COG_number COG0593; DnaA |
| [B] Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) | CITK800048 | A8ACL4 | Putative uncharacterized protein |
| [B] Haemophilus ducreyi | HAEDU00717 | DNAA_HAEDU | chromosomal replication initiator protein |
| [B] Francisella tularensis (subsp. tularensis) | FRATT00001 | A7JF04 | Similar to DNAA_ECOLI (P03004) Chromosomal replication initiator from E. coli (467 aa). FASTA: opt: 1298 Z-score: 1484.2 E(): 8.9e-75 Smith-Waterman score: 1400; 45.621 identity in 491 aa overlap chromosomal replication initiator protein dnaA |
| [B] Mycobacteriophage FRAT1 | FRAT100001 | Q14K61 | chromosomal replication initiator protein dnaA Similar to DNAA_ECOLI (P03004) Chromosomal replication initiator from E. coli (467 aa). FASTA: opt: 1298 Z-score: 1484.2 E(): 8.9e-75 Smith-Waterman score: 1400; 45.621 identity in 491 aa overlap |
| [B] Xylella fastidiosa | XYLFA00001 | DNAA_XYLFA | similar to SP|P35891 (percent identity: 53 %/query alignment coverage: 105.0 %/subject alignment coverage: 98.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder chromosomal replication initiator |
| [B] Xylella fastidiosa (strain M12) | XYLFM00001 | B0U1F9 | Chromosomal replication initiator protein dnaA |
| [B] Xylella fastidiosa (strain M23) | XYLF200001 | B2I5U6 | Chromosomal replication initiator protein DnaA |
| [B] Xylella fastidiosa (strain Temecula1 / ATCC 700964) | XYLFT00001 | DNAA_XYLFT | Chromosomal replication initiator protein dnaA |
| [B] Mycoplasma agalactiae (strain PG2) | MYCAP00001 | A5IXD9 | Chromosomal replication initiator protein DnaA |
| [B] Mycoplasma penetrans | MYCPE00001 | Q8EX49 | chromosomal replication initiator protein |