List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 189129

Zinc metallopeptidase M20/M25/M40 family
This group has 14 members: 14 [B]acteria
Fingerprint: AIWIAAQ

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Acaryochloris marina (strain MBIC 11017)ACAM101295  UniProtKB/TrEMBL B0C6L8  N-acetyl-L-amino acid amidohydrolase
[B] Cyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP404327  UniProtKB/TrEMBL B8HLC7  Amidohydrolase
[B] Gloeobacter violaceusGLOVI02530  UniProtKB/TrEMBL Q7NHJ5  probable hydrolase
[B] Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)SYNP202359  UniProtKB/TrEMBL B1XK25  Amidohydrolase subfamily
[B] Synechococcus sp. (strain CC9605)SYNSC00114  UniProtKB/TrEMBL Q3AND6  Peptidase M20D, amidohydrolase
[B] Synechococcus sp. (strain CC9902)SYNS900164  UniProtKB/TrEMBL Q3B0I9  Peptidase M20D, amidohydrolase
[B] Synechococcus sp. (strain PCC 6301)SYNP602120  UniProtKB/TrEMBL Q5N055  N-acyl-L-amino acid amidohydrolase
[B] Synechococcus sp. (strain WH7803)SYNPW00187  UniProtKB/TrEMBL A5GI48  Zinc metallopeptidase M20/M25/M40 family
[B] Synechocystis sp. (strain PCC 6803)SYNY302641  UniProtKB/Swiss-Prot Y100_SYNY3  Uncharacterized hydrolase sll0100
[B] Thermosynechococcus elongatus (strain BP-1)THEEB00013  UniProtKB/TrEMBL Q8DMU8  N-acetyl-L-amino acid amidohydrolase
[B] Anabaena variabilis (strain ATCC 29413 / PCC 7937)ANAVT01045  UniProtKB/TrEMBL Q3MEA3  Peptidase M20D, amidohydrolase
[B] Trichodesmium erythraeum (strain IMS101)TRIEI03124  UniProtKB/TrEMBL Q10YC3  Amidohydrolase
[B] Prochlorococcus marinus (strain MIT 9303)PROM300194  UniProtKB/TrEMBL A2C640  Zinc metallopeptidase M20/M25/M40 family protein
[B] Prochlorococcus marinus (strain MIT 9313)PROMM00158  UniProtKB/TrEMBL Q7V908  Zinc metallopeptidase M20/M25/M40 family