List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 193450

glutamate dehydrogenase
This group has 6 members: 6 [B]acteria
Fingerprint: RETATAM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Acaryochloris marina (strain MBIC 11017)ACAM103063  UniProtKB/TrEMBL B0CFT6  Glutamate dehydrogenase
[B] Cyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP404540  UniProtKB/TrEMBL B8HN81  Glu/Leu/Phe/Val dehydrogenase
[B] Synechocystis sp. (strain PCC 6803)SYNY302754  UniProtKB/Swiss-Prot DHE4_SYNY3  NADP-specific glutamate dehydrogenase
[B] Bacillus haloduransBACHD03873  UniProtKB/TrEMBL Q9K5Z3  glutamate dehydrogenase
[B] Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688)METC405215  UniProtKB/TrEMBL B7L300  Glu/Leu/Phe/Val dehydrogenase PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: oan:Oant_0300 Glu/Leu/Phe/Val dehydrogenase
[B] Syntrophus aciditrophicus (strain SB)SYNAS02443  UniProtKB/TrEMBL Q2LW88  glutamate dehydrogenase