List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 210920

Thymidine kinase
This group has 46 members: 1 [E]ukaryota 4 [A]rchaea 41 [B]acteria
Fingerprint: FLENTVN

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Nematostella vectensisNEMVE20037  UniProtKB/TrEMBL A7T2T1  jgi|Nemve1|221517|fgenesh1_pg.scaffold_820000001
[A] Pyrobaculum aerophilumPYRAE01707  UniProtKB/Swiss-Prot KITH_PYRAE  Thymidine kinase
[A] Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta)THENV01157  UniProtKB/TrEMBL B1Y8N7  Thymidine kinase
[A] Thermococcus kodakaraensisPYRKO01312  UniProtKB/Swiss-Prot KITH_PYRKO  Thymidine kinase
[A] Thermoplasma acidophilumTHEAC01190  UniProtKB/TrEMBL Q9HIW2  Thymidine kinase related protein
[B] Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ100583  UniProtKB/TrEMBL A5FME9  Thymidine kinase
[B] Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)FLAPJ01036  UniProtKB/TrEMBL A6GYI4  Thymidine kinase
[B] Gramella forsetii (strain KT0803)GRAFK03274  UniProtKB/TrEMBL A0M6Q0  thymidine kinase
[B] Salinibacter ruber (strain DSM 13855)SALRD02477  UniProtKB/Swiss-Prot KITH_SALRD  thymidine kinase identified by match to protein family HMM PF00265
[B] Chloroherpeton thalassium (strain ATCC 35110 / GB-78)CHLT302290  UniProtKB/TrEMBL B3QWK4  Thymidine kinase
[B] Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)DEIDV00722  UniProtKB/Swiss-Prot KITH_DEIDV  Putative thymidine kinase
[B] Deinococcus geothermalis (strain DSM 11300)DEIGD00572  UniProtKB/TrEMBL Q1J0V4  Thymidine kinase PFAM: thymidine kinase: (1.5e-63) KEGG: dra:DR1984 thymidine kinase, ev=1e-83, 77% identity
[B] Deinococcus radioduransDEIRA01926  UniProtKB/Swiss-Prot KITH_DEIRA  Thymidine kinase
[B] Bacillus amyloliquefaciens (strain FZB42)BACA203302  UniProtKB/Swiss-Prot KITH_BACA2  Tdk
[B] Bacillus licheniformis (strain DSM 13 / ATCC 14580)BACLD03726  UniProtKB/Swiss-Prot KITH_BACLD  InterProMatches:IPR001267; Molecular Function: thymidine kinase activity (GO:0004797), Molecular Function: ATP binding (GO:0005524) thymidine kinase
[B] Bacillus subtilisBACSU03704  UniProtKB/Swiss-Prot KITH_BACSU  Thymidine kinase
[B] Geobacillus kaustophilusGEOKA03346  UniProtKB/Swiss-Prot KITH_GEOKA  thymidine kinase
[B] Geobacillus thermodenitrificans (strain NG80-2)GEOTN03254  UniProtKB/Swiss-Prot KITH_GEOTN  Thymidine kinase
[B] Oceanobacillus iheyensisOCEIH02993  UniProtKB/Swiss-Prot KITH_OCEIH  CDS_ID OB2999 thymidine kinase
[B] Macrococcus caseolyticus (strain JCSC5402)MACCJ01775  UniProtKB/Swiss-Prot KITH_MACCJ  Thymidine kinase
[B] Staphylococcus aureus (strain COL)STAAC02057  UniProtKB/Swiss-Prot KITH_STAAC  identified by similarity to EGAD:23194; match to protein family HMM PF00265 thymidine kinase
[B] Staphylococcus aureus (strain JH1)STAA202130  UniProtKB/TrEMBL A6U3K4  Thymidine kinase PFAM: thymidine kinase KEGG: sav:SAV2119 thymidine kinase
[B] Staphylococcus aureus (strain JH9)STAA902100  UniProtKB/TrEMBL A5IUR4  Thymidine kinase PFAM: thymidine kinase
[B] Staphylococcus aureus (strain MRSA252)STAAR02138  UniProtKB/Swiss-Prot KITH_STAAR  Similar to Vaccinia virus (strain WR) thymidine kinase TK SW:KITH_VACCV (P03297) (177 aa) fasta scores: E(): 2.1e-18, 40.43% id in 183 aa, and to Bacillus subtilis thymidine kinase Tdk SW:KITH_BACSU (Q03221) (195 aa) fasta scores: E(): 1.2e-44, 62.24% id in 196 aa putative thymidine kinase
[B] Staphylococcus aureus (strain MSSA476)STAAS02034  UniProtKB/Swiss-Prot KITH_STAAS  Ortholog of S. aureus MRSA252 (BX571856) SAR2207 putative thymidine kinase
[B] Staphylococcus aureus (strain MW2)STAAW02042  UniProtKB/Swiss-Prot KITH_STAAW  thymidine kinase
[B] Staphylococcus aureus (strain Mu3 / ATCC 700698)STAA102083  UniProtKB/TrEMBL A7X4W5  Thymidine kinase
[B] Staphylococcus aureus (strain Mu50 / ATCC 700699)STAAM02098  UniProtKB/Swiss-Prot KITH_STAAM  thymidine kinase
[B] Staphylococcus aureus (strain N315)STAAN01968  UniProtKB/Swiss-Prot KITH_STAAN  thymidine kinase
[B] Staphylococcus aureus (strain NCTC 8325)STAA802223  UniProtKB/TrEMBL Q2FWD9  thymidine kinase, putative
[B] Staphylococcus aureus (strain Newman)STAAE01980  UniProtKB/TrEMBL A6QIW3  Thymidine kinase
[B] Staphylococcus aureus (strain USA300 / TCH1516)STAAT02057  UniProtKB/TrEMBL A8YY84  thymidine kinase
[B] Staphylococcus aureus (strain USA300)STAA301994  UniProtKB/Swiss-Prot KITH_STAA3  thymidine kinase identified by match to protein family HMM PF00265
[B] Staphylococcus aureus (strain bovine RF122)STAAB01994  UniProtKB/Swiss-Prot KITH_STAAB  thymidine kinase
[B] Staphylococcus epidermidis (strain ATCC 12228)STAES01687  UniProtKB/Swiss-Prot KITH_STAES  Thymidine kinase
[B] Staphylococcus epidermidis (strain ATCC 35984 / RP62A)STAEQ01668  UniProtKB/Swiss-Prot KITH_STAEQ  identified by similarity to EGAD:23194; match to protein family HMM PF00265 thymidine kinase
[B] Staphylococcus haemolyticus (strain JCSC1435)STAHJ00897  UniProtKB/Swiss-Prot KITH_STAHJ  thymidine kinase
[B] Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)STAS100764  UniProtKB/Swiss-Prot KITH_STAS1  similar to gi|57286327|gb|AAW38421.1| [Staphylococcus aureus subsp. aureus COL], percent identity 84 in 199 aa, BLASTP E(): 5e-95 thymidine kinase
[B] Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)NATTJ01698  UniProtKB/TrEMBL B2A5H7  Thymidine kinase
[B] Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT)COPPD00800  UniProtKB/Swiss-Prot KITH_COPPD  Thymidine kinase
[B] Acholeplasma laidlawii (strain PG-8A)ACHLI00056  UniProtKB/TrEMBL A9NEC0  Thymidine kinase
[B] Phytoplasma mali (strain AT)PHYMT00106  UniProtKB/TrEMBL B3R0G3  Thymidine kinase
[B] Phytoplasma australiensePHYAS00656  UniProtKB/TrEMBL B1VAS4  Thymidine kinase
[B] Mycoplasma genitaliumMYCGE00032  UniProtKB/Swiss-Prot KITH_MYCGE  Thymidine kinase
[B] Mycoplasma synoviae (strain 53)MYCS500504  UniProtKB/TrEMBL Q4A5P2  identified by sequence similarity; putative; ORF located using Glimmer; Blastx; COG1435 thymidine kinase
[B] Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western)UREU100636  UniProtKB/Swiss-Prot KITH_UREU1  Thymidine kinase