List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 236052

DNA polymerase III
This group has 14 members: 14 [B]acteria
Fingerprint: KPQVLKG

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Actinobacillus pleuropneumoniae serotype 3 (strain JL03)ACTPJ01984  UniProtKB/TrEMBL B0BU34  DNA polymerase III psi subunit protein
[B] Actinobacillus pleuropneumoniae serotype 5b (strain L20)ACTP201962  UniProtKB/TrEMBL A3N3U4  DNA polymerase III psi subunit protein
[B] Actinobacillus pleuropneumoniae serotype 7 (strain AP76)ACTP702062  UniProtKB/TrEMBL B3GZF2  DNA polymerase III psi subunit protein
[B] Actinobacillus succinogenes (strain ATCC 55618 / 130Z)ACTSZ00916  UniProtKB/TrEMBL A6VMV3  DNA polymerase III psi subunit
[B] Haemophilus ducreyiHAEDU00177  UniProtKB/TrEMBL Q7VP86  DNA polymerase III psi subunit protein
[B] Haemophilus influenzaeHAEIN00011  UniProtKB/Swiss-Prot HOLD_HAEIN  DNA polymerase III subunit psi
[B] Haemophilus influenzae (strain 86-028NP)HAEI800011  UniProtKB/TrEMBL Q4QPN3  Similar to: HI0011, HOLD_HAEIN DNA polymerase III, psi subunit
[B] Haemophilus influenzae (strain PittEE)HAEIE00571  UniProtKB/TrEMBL A5UBC6  DNA polymerase III subunit psi
[B] Haemophilus influenzae (strain PittGG)HAEIG00412  UniProtKB/TrEMBL A5UFI5  DNA polymerase III subunit psi
[B] Haemophilus parasuis serovar 5 (strain SH0165)HAEPS01757  UniProtKB/TrEMBL B8F839  DNA polymerase III subunit psi
[B] Haemophilus somnus (strain 129PT)HAES100494  UniProtKB/TrEMBL Q0I262  DNA-directed DNA polymerase
[B] Haemophilus somnus (strain 2336)HAES201738  UniProtKB/TrEMBL B0UW01  DNA polymerase III psi subunit
[B] Mannheimia succiniciproducens (strain MBEL55E)MANSM01585  UniProtKB/TrEMBL Q65S64  Hypothetical protein
[B] Pasteurella multocidaPASMU00959  UniProtKB/TrEMBL Q9CM78  Hold