List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 317439
This group has 2 members: 1 [E]ukaryota
Internal infos: group_nr=317439; pid=9522, generation_time=0.008
|[E] Homo sapiens||HUMAN06978|| MLRV_HUMAN ||myosin, light chain 2, regulatory, cardiac, slow [Source:HGNC Symbol;Acc:7583]|
|[A] Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)||AERPE01587|| Q9Y939 ||Hypothetical protein|