List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 1843

DNA-directed RNA polymerase
This group has 129 members: 1 [E]ukaryota 128 [B]acteria
Fingerprint: QRDLTYA

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Guillardia theta (nucleomorph only)GUITH00535  UniProtKB/Swiss-Prot RPOB_GUITH  RNA polymerase b-chain
[B] Acidobacteria bacterium (strain Ellin345)ACIBL04665  UniProtKB/Swiss-Prot RPOB_ACIBL  DNA-directed RNA polymerase, beta subunit
[B] Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)ACIC502768  UniProtKB/TrEMBL C1F3Y3  DNA-directed RNA polymerase, beta subunit
[B] Solibacter usitatus (strain Ellin6076)SOLUE05330   ABJ86404.1  DNA-directed RNA polymerase, beta subunit KEGG: aba:Acid345_4676 DNA-directed RNA polymerase, beta subunit TIGRFAM: DNA-directed RNA polymerase, beta subunit PFAM: RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 3
[B] Corynebacterium jeikeium (strain K411)CORJK01773  UniProtKB/Swiss-Prot RPOB_CORJK  DNA-directed RNA polymerase, beta subunit
[B] Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)CORU700296  UniProtKB/Swiss-Prot RPOB_CORU7  DNA-directed RNA polymerase, beta subunit
[B] Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083)BIFAA01316   BAF40100.1  DNA-directed RNA polymerase beta chain DNA-dependent RNA polymerase catalyzes thetranscription of DNA into RNA using the fourribonucleoside triphosphates as substrates Orthologue of Rv0667_BL1205
[B] Bifidobacterium longumBIFLO00847  UniProtKB/Swiss-Prot RPOB_BIFLO  DNA-directed RNA polymerase subunit beta
[B] Bifidobacterium longum (strain DJO10A)BIFLD00949  UniProtKB/Swiss-Prot RPOB_BIFLD  DNA-directed RNA polymerase beta subunit
[B] Aquifex aeolicusAQUAE01338  UniProtKB/Swiss-Prot RPOB_AQUAE  DNA-directed RNA polymerase subunit beta
[B] Hydrogenobaculum sp. (strain Y04AAS1)HYDS000255  UniProtKB/TrEMBL B4U737  DNA-directed RNA polymerase, beta subunit
[B] Sulcia muelleri (strain GWSS)SULMW00050  UniProtKB/Swiss-Prot RPOB_SULMW  DNA-directed RNA polymerase beta subunit
[B] Gramella forsetii (strain KT0803)GRAFK02313  UniProtKB/Swiss-Prot RPOB_GRAFK  DNA-directed RNA polymerase subunit beta
[B] Chlamydia pneumoniaeCHLPN00357  UniProtKB/Swiss-Prot RPOB_CHLPN  DNA-directed RNA polymerase subunit beta
[B] Chlamydophila caviaeCHLCV00679  UniProtKB/Swiss-Prot RPOB_CHLCV  identified by match to PFAM protein family HMM PF02601 DNA-directed RNA polymerase, beta subunit
[B] Chlamydophila felis (strain Fe/C-56)CHLFF00320  UniProtKB/Swiss-Prot RPOB_CHLFF  DNA-directed RNA polymerase beta chain EC 2.7.7.6
[B] Dehalococcoides sp. (strain BAV1)DEHSB00557   ABQ17163.1  DNA-directed RNA polymerase
[B] Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)THERP00949  UniProtKB/TrEMBL B9KZZ4  DNA-directed RNA polymerase, beta subunit
[B] Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)DEIDV00647  UniProtKB/TrEMBL C1D0S0  Putative DNA-directed RNA polymerase, beta subunit
[B] Deinococcus geothermalis (strain DSM 11300)DEIGD00629  UniProtKB/Swiss-Prot RPOB_DEIGD  DNA-directed RNA polymerase, beta subunit KEGG: dra:DR0912 DNA-directed RNA polymerase, beta subunit, ev=0.0, 89% identity TIGRFAM: DNA-directed RNA polymerase, beta subunit: (0) PFAM: RNA polymerase Rpb2, domain 6: (1.8e-185) RNA polymerase Rpb2, domain 7: (2.3e-48) RNA polymerase beta subunit: (4.1e-38) RNA polymerase Rpb2, domain 3: (2.6e-40)
[B] Deinococcus radioduransDEIRA00892  UniProtKB/Swiss-Prot RPOB_DEIRA  DNA-directed RNA polymerase subunit beta
[B] Rhodopirellula balticaRHOBA02994   NP_866682.1  PMID: 6266829 best DB hits: BLAST: swissprot:Q9Z9A0; RPOB_CHLPN DNA-DIRECTED RNA POLYMERASE BETA CHAIN; E=0.0 pir:F81548; DNA-directed RNA polymerase, beta chain CP0694 [imported]; E=0.0 ddbj:BAA98291.1; (AP002545) RNA polymerase beta [Chlamydophila; E=0.0 COG: CPn0081; COG0085 DNA-directed RNA polymerase beta subunit/140 kD; E=0.0 CT315; COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; E=0.0 PA4270; COG0085 DNA-directed RNA polymerase beta subunit/140 kD; E=0.0 PFAM: PF01155; Hydrogenase expression/synthesi; E=0.17 PF00562; RNA polymerase beta subunit; E=0 DNA-directed RNA polymerase beta chain
[B] Caulobacter crescentusCAUCR00500  UniProtKB/Swiss-Prot RPOB_CAUCR  DNA-directed RNA polymerase subunit beta
[B] Caulobacter sp. (strain K31)CAUSK00767  UniProtKB/Swiss-Prot RPOB_CAUSK  DNA-directed RNA polymerase, beta subunit
[B] Bartonella bacilliformis (strain ATCC 35685 / KC583)BARBK00540  UniProtKB/Swiss-Prot RPOB_BARBK  DNA-directed RNA polymerase, beta subunit
[B] Bartonella henselaeBARHE00592  UniProtKB/Swiss-Prot RPOB_BARHE  DNA-directed RNA polymerase beta chain
[B] Bartonella quintanaBARQU00694  UniProtKB/Swiss-Prot RPOB_BARQU  DNA-directed RNA polymerase beta chain
[B] Bartonella tribocorum (strain CIP 105476 / IBS 506)BART100747  UniProtKB/Swiss-Prot RPOB_BART1  DNA-directed RNA polymerase, beta chain hypothetical protein
[B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII901324  UniProtKB/TrEMBL B2IK55  DNA-directed RNA polymerase, beta subunit
[B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)METSB03763  UniProtKB/TrEMBL B8EMS1  DNA-directed RNA polymerase
[B] Bradyrhizobium japonicumBRAJA05353  UniProtKB/Swiss-Prot RPOB_BRAJA  DNA-directed RNA polymerase subunit beta
[B] Nitrobacter hamburgensis (strain X14 / DSM 10229)NITHX01433  UniProtKB/Swiss-Prot RPOB_NITHX  DNA-directed RNA polymerase, beta subunit
[B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)NITWN01270  UniProtKB/Swiss-Prot RPOB_NITWN  DNA-directed RNA polymerase, beta subunit
[B] Rhodopseudomonas palustrisRHOPA03257  UniProtKB/Swiss-Prot RPOB_RHOPA  observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished RNA polymerase beta subunit
[B] Rhodopseudomonas palustris (strain BisA53)RHOP503543  UniProtKB/Swiss-Prot RPOB_RHOP5  DNA-directed RNA polymerase, beta subunit KEGG: rpc:RPC_3458 DNA-directed RNA polymerase, beta subunit TIGRFAM: DNA-directed RNA polymerase, beta subunit PFAM: RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 3
[B] Rhodopseudomonas palustris (strain BisB18)RHOPB03398  UniProtKB/Swiss-Prot RPOB_RHOPB  DNA-directed RNA polymerase, beta subunit
[B] Rhodopseudomonas palustris (strain BisB5)RHOPS03174  UniProtKB/Swiss-Prot RPOB_RHOPS  DNA-directed RNA polymerase, beta subunit
[B] Rhodopseudomonas palustris (strain HaA2)RHOP202276  UniProtKB/Swiss-Prot RPOB_RHOP2  DNA-directed RNA polymerase, beta subunit
[B] Rhodopseudomonas palustris (strain TIE-1)RHOPT03621  UniProtKB/Swiss-Prot RPOB_RHOPT  DNA-directed RNA polymerase, beta subunit
[B] Brucella abortusBRUAB01156  UniProtKB/Swiss-Prot RPOB_BRUAB  similar to BR1243, DNA-directed RNA polymerase RpoB, DNA-directed RNA polymerase
[B] Brucella abortus (strain 2308)BRUA201250  UniProtKB/Swiss-Prot RPOB_BRUA2  RNA polymerase Rpb2, domain 6:RNA polymerase, beta subunit:RNA polymerase Rpb2, domain 7:RNA polymerase Rpb2, domain 2:RNA po...
[B] Brucella abortus (strain S19)BRUA101115  UniProtKB/Swiss-Prot RPOB_BRUA1  DNA-directed RNA polymerase beta subunit
[B] Brucella canis (strain ATCC 23365 / NCTC 10854)BRUC201199  UniProtKB/Swiss-Prot RPOB_BRUC2  DNA-directed RNA polymerase
[B] Brucella melitensisBRUME00746  UniProtKB/Swiss-Prot RPOB_BRUME  DNA-directed RNA polymerase subunit beta
[B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO201075  UniProtKB/Swiss-Prot RPOB_BRUO2  DNA-directed RNA polymerase, beta subunit
[B] Brucella suisBRUSU01197  UniProtKB/Swiss-Prot RPOB_BRUSU  similar to GB:M27377, GB:U32525, and PID:639897; identified by sequence similarity; putative DNA-directed RNA polymerase, beta subunit
[B] Brucella suis (strain ATCC 23445 / NCTC 10510)BRUSI01216  UniProtKB/Swiss-Prot RPOB_BRUSI  DNA-directed RNA polymerase, beta subunit GO_component: cytosolic DNA-directed RNA polymerase complex [GO ID 0000345]; GO_function: DNA-directed RNA polymerase activity [GO ID 0003899]; GO_process: transcription [GO ID 0006350]
[B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)OCHA401921  UniProtKB/Swiss-Prot RPOB_OCHA4  DNA-directed RNA polymerase
[B] Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688)METC404174  UniProtKB/Swiss-Prot RPOB_METC4  DNA-directed RNA polymerase, beta subunit TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase beta subunit; KEGG: mex:Mext_4017 DNA-directed RNA polymerase subunit beta
[B] Methylobacterium extorquens (strain PA1)METEP03951  UniProtKB/Swiss-Prot RPOB_METEP  DNA-directed RNA polymerase, beta subunit
[B] Methylobacterium nodulans (strain ORS2060 / LMG 21967)METNO01804  UniProtKB/Swiss-Prot RPOB_METNO  DNA-directed RNA polymerase
[B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB04367  UniProtKB/Swiss-Prot RPOB_METPB  DNA-directed RNA polymerase, beta subunit
[B] Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)METRJ03772  UniProtKB/Swiss-Prot RPOB_METRJ  DNA-directed RNA polymerase
[B] Methylobacterium sp. (strain 4-46)METS400341  UniProtKB/Swiss-Prot RPOB_METS4  DNA-directed RNA polymerase
[B] Mesorhizobium sp. (strain BNC1)MESSB01807  UniProtKB/Swiss-Prot RPOB_MESSB  DNA-directed RNA polymerase, beta subunit TIGRFAM: DNA-directed RNA polymerase, beta subunit PFAM: RNA polymerase Rpb2, domain 6 RNA polymerase Rpb2, domain 7 RNA polymerase Rpb2, domain 2 RNA polymerase beta subunit RNA polymerase Rpb2, domain 3 KEGG: mlo:mlr0276 RNA polymerase beta subunit
[B] Rhizobium lotiRHILO00215  UniProtKB/Swiss-Prot RPOB_RHILO  RNA polymerase beta subunit
[B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK01470  UniProtKB/Swiss-Prot RPOB_AGRRK  DNA-directed RNA polymerase
[B] Agrobacterium tumefaciens (strain C58 / ATCC 33970)AGRT501911  UniProtKB/Swiss-Prot RPOB_AGRT5  DNA-directed RNA polymerase subunit beta
[B] Rhizobium etli (strain CFN 42 / ATCC 51251)RHIEC01623  UniProtKB/Swiss-Prot RPOB_RHIEC  DNA-directed RNA polymerase beta chain protein similar to rpoB (SMc01317) [Sinorhizobium meliloti] and AGR_C_3569p [Agrobacterium tumefaciens] Similar to swissprot:Q92QH7 Putative location:bacterial cytoplasm Psort-Score: 0.3841; go_function: transferase activity [goid 0016740]; go_function: nucleotidyltransferase activity [goid 0016779]; go_function: DNA binding [goid 0003677]; go_function: DNA-directed RNA polymerase activity [goid 0003899]; go_process: transcription [goid 0006350]
[B] Rhizobium etli (strain CIAT 652)RHIE601712  UniProtKB/Swiss-Prot RPOB_RHIE6  DNA-directed RNA polymerase protein, beta subunit
[B] Rhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW01309  UniProtKB/Swiss-Prot RPOB_RHILW  DNA-directed RNA polymerase subunit beta
[B] Rhizobium leguminosarum bv. viciae (strain 3841)RHIL301770  UniProtKB/Swiss-Prot RPOB_RHIL3  putative DNA-directed RNA polymerase beta chain similarity:fasta; with=UniProt:RPOB_ECOLI (EMBL:AE005630); Shigella flexneri.; rpoB; DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit).; length=1342; id 58.382; 1360 aa overlap; query 6-1363; subject 4-1341 similarity:fasta; with=UniProt:RPOB_RHIME (EMBL:SME591787); Rhizobium meliloti (Sinorhizobium meliloti).; rpoB; DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit).; length=1380; id 90.942; 1380 aa overlap; query 1-1379; subject 1-1380
[B] Rhizobium melilotiRHIME01332  UniProtKB/Swiss-Prot RPOB_RHIME  Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE DNA-DIRECTED RNA POLYMERASE BETA CHAIN PROTEIN
[B] Sinorhizobium medicae (strain WSM419)SINMW00966  UniProtKB/Swiss-Prot RPOB_SINMW  DNA-directed RNA polymerase subunit beta
[B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)AZOC500883  UniProtKB/Swiss-Prot RPOB_AZOC5  DNA-directed RNA polymerase beta subunit
[B] Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)XANP203274  UniProtKB/Swiss-Prot RPOB_XANP2  DNA-directed RNA polymerase
[B] Maricaulis maris (strain MCS10)MARMM01796  UniProtKB/Swiss-Prot RPOB_MARMM  DNA-directed RNA polymerase, beta subunit
[B] Dinoroseobacter shibae (strain DFL 12)DINSH00267  UniProtKB/Swiss-Prot RPOB_DINSH  DNA-directed RNA polymerase
[B] Jannaschia sp. (strain CCS1)JANSC00566   ABD53485.1  DNA-directed RNA polymerase, beta subunit
[B] Silicibacter pomeroyiSILPO03416  UniProtKB/Swiss-Prot RPOB_SILPO  identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013 DNA-directed RNA polymerase, beta subunit
[B] Acidiphilium cryptum (strain JF-5)ACICJ01911  UniProtKB/Swiss-Prot RPOB_ACICJ  DNA-directed RNA polymerase
[B] Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)GLUDA03329  UniProtKB/TrEMBL A9H3S2  DNA-directed RNA polymerase beta chain
[B] Gluconobacter oxydansGLUOX00369  UniProtKB/TrEMBL Q5FTX7  DNA-directed RNA polymerase beta chain
[B] Granulobacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)GRABC00548  UniProtKB/Swiss-Prot RPOB_GRABC  DNA-directed RNA polymerase beta chain
[B] Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)MAGMM03096   BAE51944.1  DNA-directed RNA polymerase, beta subunit/140 kD subunit
[B] Rhodospirillum centenum (strain ATCC 51521 / SW)RHOCS00675  UniProtKB/Swiss-Prot RPOB_RHOCS  DNA-directed RNA polymerase, beta subunit
[B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)RHORT02684  UniProtKB/Swiss-Prot RPOB_RHORT  DNA-directed RNA polymerase, beta subunit
[B] Anaplasma marginale (strain St. Maries)ANAMM00174  UniProtKB/Swiss-Prot RPOB_ANAMM  COG0085 RpoB DNA-directed RNA polymerase beta subunit/140 kD subunit RNA polymerase beta subunit
[B] Anaplasma phagocytophilum (strain HZ)ANAPZ00922  UniProtKB/Swiss-Prot RPOB_ANAPZ  DNA-directed RNA polymerase, beta subunit identified by similarity to SP:O52271; match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04565; match to protein family HMM TIGR02013
[B] Ehrlichia canis (strain Jake)EHRCJ00168  UniProtKB/Swiss-Prot RPOB_EHRCJ  DNA-directed RNA polymerase, beta subunit
[B] Ehrlichia chaffeensis (strain Arkansas)EHRCR00897  UniProtKB/Swiss-Prot RPOB_EHRCR  DNA-directed RNA polymerase, beta subunit identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04565; match to protein family HMM TIGR02013
[B] Ehrlichia ruminantium (strain Gardel)EHRRG00164  UniProtKB/Swiss-Prot RPOB_EHRRG  Similar to sp|Q9RH41|RPOB_RICCN sp|O52271|RPOB_RICPR; Ortholog to ERWE_CDS_01710 DNA-directed RNA polymerase beta chain
[B] Ehrlichia ruminantium (strain Welgevonden)EHRRW00171  UniProtKB/Swiss-Prot RPOB_EHRRW  Similar to sp|Q9RH41|RPOB_RICCN sp|O52271|RPOB_RICPR; Ortholog to ERGA_CDS_01650 DNA-directed RNA polymerase beta chain
[B] Orientia tsutsugamushi (strain Boryong)ORITB00166  UniProtKB/Swiss-Prot RPOB_ORITB  DNA-directed RNA polymerase beta chain
[B] Orientia tsutsugamushi (strain Ikeda)ORITI01461  UniProtKB/TrEMBL B3CV55  DNA-directed RNA polymerase beta chain
[B] Rickettsia canadensis (strain McKiel)RICCK00138  UniProtKB/Swiss-Prot RPOB_RICCK  DNA-directed RNA polymerase subunit beta
[B] Rickettsia prowazekiiRICPR00135  UniProtKB/Swiss-Prot RPOB_RICPR  DNA-DIRECTED RNA POLYMERASE BETA CHAIN (rpoB)
[B] Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)SPHWW03423  UniProtKB/Swiss-Prot RPOB_SPHWW  DNA-directed RNA polymerase
[B] Zymomonas mobilisZYMMO00725  UniProtKB/Swiss-Prot RPOB_ZYMMO  COG0085 DNA-directed RNA polymerase 140 kD subunit
[B] Bordetella avium (strain 197N)BORA100012   CAJ47597.1  DNA-directed RNA polymerase beta chain
[B] Bordetella bronchisepticaBORBR00014   NP_886567.1  ortholog of Bordetella pertussis (BX470248) BP0015 DNA-directed RNA polymerase beta chain
[B] Bordetella pertussisBORPE00014  UniProtKB/Swiss-Prot RPOB_BORPE  Similar to Escherichia coli DNA-directed RNA polymerase beta chain RpoB or GroN or NitB or Rif or Ron or Stl or Stv or TabD or B3987 or Z5560 or ECS4910 SW:RPOB_ECOLI (P00575) (1342 aa) fasta scores: E(): 0, 64.260% id in 1371 aa, and to Pseudomonas aeruginosa DNA-directed RNA polymerase beta chain RpoB or PA4270 SW:RPOB_PSEAE (Q51561) (1357 aa) fasta scores: E(): 0, 67.080% id in 1370 aa DNA-directed RNA polymerase beta chain
[B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD04882  UniProtKB/Swiss-Prot RPOB_BORPD  DNA-directed RNA polymerase beta chain
[B] Burkholderia ambifaria (strain MC40-6)BURA400265  UniProtKB/Swiss-Prot RPOB_BURA4  DNA-directed RNA polymerase, beta subunit
[B] Burkholderia cepacia (strain ATCC 53795 / AMMD)BURCM00257  UniProtKB/Swiss-Prot RPOB_BURCM  DNA-directed RNA polymerase, beta subunit KEGG: bur:Bcep18194_A3439 DNA-directed RNA polymerase, beta subunit TIGRFAM: DNA-directed RNA polymerase, beta subunit PFAM: RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 3
[B] Burkholderia multivorans (strain ATCC 17616 / 249)BURM103111  UniProtKB/Swiss-Prot RPOB_BURM1  DNA-directed RNA polymerase, beta subunit
[B] Burkholderia sp. (strain 383)BURS300257  UniProtKB/Swiss-Prot RPOB_BURS3  DNA-directed RNA polymerase, beta subunit
[B] Burkholderia vietnamiensis (strain G4 / LMG 22486)BURVG00296  UniProtKB/Swiss-Prot RPOB_BURVG  DNA-directed RNA polymerase, beta subunit
[B] Burkholderia malleiBURMA02198  UniProtKB/Swiss-Prot RPOB_BURMA  DNA-directed RNA polymerase subunit beta
[B] Burkholderia mallei (strain NCTC 10229)BURM901805  UniProtKB/Swiss-Prot RPOB_BURM9  DNA-directed RNA polymerase, beta subunit
[B] Burkholderia mallei (strain NCTC 10247)BURM703246  UniProtKB/Swiss-Prot RPOB_BURM7  DNA-directed RNA polymerase, beta subunit
[B] Burkholderia pseudomalleiBURPS03230  UniProtKB/Swiss-Prot RPOB_BURPS  Similar to Escherichia coli DNA-directed RNA polymerase beta chain SWALL:RPOB_ECOLI (SWALL:P00575) (1342 aa) fasta scores: E(): 0, 66.03% id in 1369 aa DNA-directed RNA polymerase beta chain
[B] Burkholderia pseudomallei (strain 1106a)BURP003738  UniProtKB/Swiss-Prot RPOB_BURP0  DNA-directed RNA polymerase, beta subunit
[B] Burkholderia pseudomallei (strain 1710b)BURP103705  UniProtKB/Swiss-Prot RPOB_BURP1  DNA-directed RNA polymerase, beta subunit identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013
[B] Burkholderia pseudomallei (strain 668)BURP603696  UniProtKB/Swiss-Prot RPOB_BURP6  DNA-directed RNA polymerase subunit beta
[B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA02962  UniProtKB/Swiss-Prot RPOB_BURTA  DNA-directed RNA polymerase, beta subunit identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013
[B] Ralstonia solanacearumRALSO03007  UniProtKB/Swiss-Prot RPOB_RALSO  Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE DNA-DIRECTED RNA POLYMERASE (BETA CHAIN) PROTEIN
[B] Acidovorax avenae subsp. citrulli (strain AAC00-1)ACIAC04342  UniProtKB/Swiss-Prot RPOB_ACIAC  DNA-directed RNA polymerase, beta subunit KEGG: pol:Bpro_4442 DNA-directed RNA polymerase, beta subunit TIGRFAM: DNA-directed RNA polymerase, beta subunit PFAM: RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 3
[B] Polaromonas sp. (strain JS666 / ATCC BAA-500)POLSJ04349  UniProtKB/Swiss-Prot RPOB_POLSJ  DNA-directed RNA polymerase, beta subunit
[B] Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)RHOFD03517   ABD71296.1  DNA-directed RNA polymerase, beta subunit
[B] Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)LEPCP03825  UniProtKB/TrEMBL B1Y7H3  DNA-directed RNA polymerase, beta subunit
[B] Methylibium petroleiphilum (strain PM1)METPP03395  UniProtKB/Swiss-Prot RPOB_METPP  DNA-directed RNA polymerase
[B] Herminiimonas arsenicoxydansHERAR03030  UniProtKB/Swiss-Prot RPOB_HERAR  DNA-directed RNA polymerase
[B] Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis)JANMA03418   ABR88926.1  DNA-directed RNA polymerase, beta subunit/140 kD subunit
[B] Thiobacillus denitrificans (strain ATCC 25259)THIDA00397  UniProtKB/Swiss-Prot RPOB_THIDA  DNA-directed RNA polymerase, beta subunit
[B] Neisseria meningitidis serogroup C (strain 053442)NEIM001897  UniProtKB/TrEMBL A9M3X4  DNA-directed RNA polymerase beta chain Code: K; COG: COG0085
[B] Nitrosomonas europaeaNITEU01976  UniProtKB/Swiss-Prot RPOB_NITEU  RNA polymerases beta subunit
[B] Nitrosomonas eutropha (strain C71)NITEC01689  UniProtKB/Swiss-Prot RPOB_NITEC  DNA-directed RNA polymerase, beta subunit KEGG: neu:NE2046 RNA polymerases beta subunit TIGRFAM: DNA-directed RNA polymerase, beta subunit PFAM: RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 3
[B] Bdellovibrio bacteriovorusBDEBA02733   NP_969761.1  InterPro: RNA polymerases beta subunit hypothetical protein DNA-directed RNA polymerase beta chain
[B] Myxococcus xanthus (strain DK 1622)MYXXD02944  UniProtKB/Swiss-Prot RPOB_MYXXD  DNA-directed RNA polymerase, beta subunit identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013
[B] Coxiella burnetiiCOXBU00217  UniProtKB/Swiss-Prot RPOB_COXBU  similar to SP:O87903, and SP:P00575; identified by sequence similarity; putative DNA-directed RNA polymerase, beta subunit
[B] Coxiella burnetii (strain CbuG_Q212)COXB201546  UniProtKB/Swiss-Prot RPOB_COXB2  DNA-directed RNA polymerase subunit beta
[B] Coxiella burnetii (strain Dugway 5J108-111)COXBN01738  UniProtKB/Swiss-Prot RPOB_COXBN  DNA-directed RNA polymerase, beta subunit
[B] Coxiella burnetii (strain RSA 331 / Henzerling II)COXBR00268  UniProtKB/Swiss-Prot RPOB_COXBR  DNA-directed RNA polymerase, beta subunit
[B] Vibrio fischeri (strain ATCC 700601 / ES114)VIBF102409  UniProtKB/TrEMBL Q5E238  DNA-directed RNA polymerase beta chain
[B] Treponema pallidumTREPA00239  UniProtKB/Swiss-Prot RPOB_TREPA  similar to PID:1050193 SP:Q59191 PID:1369760 percent identity: 61.40; identified by sequence similarity; putative DNA-directed RNA polymerase, beta subunit (rpoB)
[B] Treponema pallidum subsp. pallidum (strain SS14)TREPS00238  UniProtKB/TrEMBL B2S2I8  DNA-directed RNA polymerase, beta subunit
[B] Methylokorus infernorum (strain V4)METI400799  UniProtKB/Swiss-Prot RPOB_METI4  DNA-directed RNA polymerase, beta subunit
[B] Elusimicrobium minutum (strain Pei191)ELUMP01408  UniProtKB/TrEMBL B2KEN1  DNA-directed RNA polymerase, beta subunit