List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.

Keyword Protein Sequence Group Entry

OMA Group 182022

apolipoprotein E
This group has 30 members: 30 [E]ukaryota
Fingerprint: PLQERAQ

Protein List | Alignment | Close Groups | Ontology Download: download fasta, download darwin

[E] Homo sapiensHUMAN15351  UniProtKB/Swiss-Prot APOE_HUMAN  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Pan troglodytesPANTR07433  UniProtKB/TrEMBL H2RAR8  apolipoprotein E precursor [Source:RefSeq peptide;Acc:NP_001009007]
[E] Pongo abeliiPONAB07411  UniProtKB/TrEMBL H2NZ64  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Nomascus leucogenysNOMLE10125  UniProtKB/TrEMBL G1QMD1  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Macaca mulattaMACMU12238  UniProtKB/TrEMBL F7BSJ1  Apolipoprotein E [Source:UniProtKB/Swiss- Prot;Acc:Q28502]
[E] Callithrix jacchusCALJA13013  UniProtKB/TrEMBL F7EFI1  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Microcebus murinusMICMU02879  Ensembl ENSMICP00000012801  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Otolemur garnettiiOTOGA03787  UniProtKB/TrEMBL H0XEH5  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Cavia porcellusCAVPO03998  UniProtKB/TrEMBL H0V9M0  Apolipoprotein E [Source:UniProtKB/Swiss- Prot;Acc:P23529]
[E] Dipodomys ordiiDIPOR07751  Ensembl ENSDORP00000003348  apolipoprotein E [Source:MGI Symbol;Acc:MGI:88057]
[E] Mus musculusMOUSE19769  UniProtKB/Swiss-Prot APOE_MOUSE  apolipoprotein E [Source:MGI Symbol;Acc:MGI:88057]
[E] Rattus norvegicusRATNO00689  UniProtKB/Swiss-Prot APOE_RAT  Apolipoprotein E [Source:UniProtKB/Swiss- Prot;Acc:P02650]
[E] Loxodonta africanaLOXAF17957  UniProtKB/TrEMBL G3TD13  Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G3TD13]
[E] Canis familiarisCANFA00952  UniProtKB/TrEMBL F1PJ74  Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F1PJ74]
[E] Mustela putorius furoMUSPF07035  UniProtKB/TrEMBL M3Y4C4  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Ailuropoda melanoleucaAILME07623  UniProtKB/TrEMBL G1M247  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Tursiops truncatusTURTR01229  Ensembl ENSTTRP00000008256  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Bos taurusBOVIN06810  Ensembl ENSBTAP00000013354  Apolipoprotein E [Source:UniProtKB/Swiss- Prot;Acc:Q03247]
[E] Sus scrofaPIGXX16172  UniProtKB/TrEMBL F1RM45  Apolipoprotein E [Source:UniProtKB/Swiss- Prot;Acc:P18650]
[E] Pteropus vampyrusPTEVA10425  Ensembl ENSPVAP00000015047  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Myotis lucifugusMYOLU15211  UniProtKB/TrEMBL G1P792  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Dasypus novemcinctusDASNO02359  Ensembl ENSDNOP00000009703  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Sarcophilus harrisiiSARHA04451  UniProtKB/TrEMBL G3VE56  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Ornithorhynchus anatinusORNAN18182  UniProtKB/TrEMBL F6X749  Apolipoprotein E precursor (Apo-E)
[E] Latimeria chalumnaeLATCH11372  UniProtKB/TrEMBL H3B366  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Oryzias latipesORYLA02022  UniProtKB/TrEMBL H2LZH1  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Xiphophorus maculatusXIPMA12940  UniProtKB/TrEMBL M4ANU3  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Gasterosteus aculeatusGASAC05313  UniProtKB/TrEMBL G3NCX8  apolipoprotein E [Source:HGNC Symbol;Acc:613]
[E] Takifugu rubripesTAKRU14186  UniProtKB/TrEMBL H2TZZ8  apolipoprotein E1 [Source:RefSeq peptide;Acc:NP_001072060]
[E] Danio rerioDANRE10080  UniProtKB/TrEMBL Q503V2  apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724- 18]

Internal infos: group_nr=182022; pid=4010, generation_time=0.015