List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 310208

identified by sequence similarity; putative; ORF located using
This group has 13 members: 13 [B]acteria
Fingerprint: NYMDIGH

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Salinispora arenicola (strain CNS-205)SALAI03767  UniProtKB/TrEMBL A8M2G4  Glycoside hydrolase family 6
[B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO03537  UniProtKB/TrEMBL A4XAT4  Glycoside hydrolase, family 6 precursor
[B] Ralstonia solanacearumRALSO03964  UniProtKB/TrEMBL Q8XS97  Product confidence : probable Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology PROBABLE EXOGLUCANASE A (1,4-BETA-CELLOBIOSIDASE) PROTEIN
[B] Xanthomonas campestris pv. campestrisXANCP03434  UniProtKB/TrEMBL Q8P514  1,4-beta-cellobiosidase
[B] Xanthomonas campestris pv. campestris (strain 8004)XANC800603  UniProtKB/TrEMBL Q4UZ17  1,4-beta-cellobiosidase
[B] Xanthomonas campestris pv. campestris (strain B100)XANCB00654  UniProtKB/TrEMBL B0RNG5  Exported cellulose 1,4-beta-cellobiosidase
[B] Xanthomonas oryzae (pv. oryzae)XANOR03615  UniProtKB/TrEMBL Q5GVI4  identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark 1,4-beta-cellobiosidase
[B] Xanthomonas oryzae pv. oryzae (strain MAFF 311018)XANOM03498  UniProtKB/TrEMBL Q2NYR7  1,4-beta-cellobiosidase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker
[B] Xanthomonas oryzae pv. oryzae (strain PXO99A)XANOP00754  UniProtKB/TrEMBL B2SM56  Exoglucanase A
[B] Xylella fastidiosaXYLFA01260  UniProtKB/TrEMBL Q9PDW2  similar to SP|P50401 (percent identity: 46 %/query alignment coverage: 83.9 %/subject alignment coverage: 65.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder 1,4-beta-cellobiosidase
[B] Xylella fastidiosa (strain M12)XYLFM00515  UniProtKB/TrEMBL B0U5U8  Cellulase precursor
[B] Xylella fastidiosa (strain M23)XYLF200520  UniProtKB/TrEMBL B2I922  Cellulose 1,4-beta-cellobiosidase precursor
[B] Xylella fastidiosa (strain Temecula1 / ATCC 700964)XYLFT00485  UniProtKB/TrEMBL Q87E00  Cellulose 1,4-beta-cellobiosidase