List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 46830

identified by sequence similarity; putative; ORF located using
This group has 11 members: 1 [A]rchaea 10 [B]acteria
Fingerprint: PDANNSG

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Pyrococcus horikoshiiPYRHO01212  UniProtKB/TrEMBL O58925  458aa long hypothetical endo-1,4-beta-glucanase
[B] Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)CLAM302470  UniProtKB/TrEMBL A5CTT9  Putative secreted cellulase containing cellulose- binding domain
[B] Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667)CLAMS00042   CLAMS_Chromosome.44  pseudo
[B] Clostridium acetobutylicumCLOAB00901  UniProtKB/TrEMBL Q97KK6  Possible non-processive endoglucanase family 5, secreted; CelA homolog secreted; dockerin domain
[B] Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE00720  UniProtKB/TrEMBL B8I7W1  glycoside hydrolase family 5 PFAM: glycoside hydrolase family 5; cellulosome protein dockerin type I; KEGG: cth:Cthe_2872 glycoside hydrolase family protein
[B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)CLOPH01145  UniProtKB/TrEMBL A9KN42  Cellulase precursor
[B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237)CLOTH02739  UniProtKB/Swiss-Prot GUNG_CLOTH  Endoglucanase G precursor
[B] Rhodopseudomonas palustris (strain HaA2)RHOP201007  UniProtKB/TrEMBL Q2J1E0  Glycoside hydrolase, family 5
[B] Xanthomonas campestris pv. vesicatoria (strain 85-10)XANC500654  UniProtKB/TrEMBL Q3BXW2  extracellular endoglucanase precursor
[B] Xanthomonas oryzae (pv. oryzae)XANOR03601  UniProtKB/TrEMBL Q5GVK0  identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark cellulase
[B] Xanthomonas oryzae pv. oryzae (strain MAFF 311018)XANOM03483  UniProtKB/TrEMBL Q2NYT3  cellulase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker