List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 196476

Glutamate racemase
This group has 7 members: 1 [E]ukaryota 6 [B]acteria
Fingerprint: IYYADTL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Xenopus tropicalisXENTR20717  Ensembl ENSXETP00000053113   -
[B] Acidovorax avenae subsp. citrulli (strain AAC00-1)ACIAC01423  UniProtKB/TrEMBL A1TM90  glutamate racemase KEGG: pol:Bpro_2045 glutamate racemase TIGRFAM: glutamate racemase PFAM: Asp/Glu racemase
[B] Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)LEPCP02516  UniProtKB/TrEMBL B1Y6H0  Glutamate racemase
[B] Shigella flexneri serotype 5b (strain 8401)SHIF803495  UniProtKB/Swiss-Prot MURI_SHIF8  glutamate racemase Code: M; COG: COG0796
[B] Psychrobacter arcticus (strain DSM 17307 / 273-4)PSYA201932  UniProtKB/TrEMBL Q4FQA6  Glutamate racemase
[B] Psychrobacter cryohalolentis (strain K5)PSYCK02228  UniProtKB/TrEMBL Q1Q8H7  Glutamate racemase
[B] Psychrobacter sp. (strain PRwf-1)PSYWF00277  UniProtKB/TrEMBL A5WC48  Glutamate racemase