List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 234647
TIGRFAM: catalase/peroxidase HPI PFAM: Haem peroxidase
This group has 9 members: 9 [B]acteria
Fingerprint: NGWANSV
| [B] Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | MYCS206053 | KATG1_MYCS2 | Catalase/peroxidase HPI |
| [B] Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) | MYCVP02880 | KATG2_MYCVP | catalase/peroxidase HPI KEGG: mbo:Mb1943c catalase-peroxidase-peroxynitritase T KatG TIGRFAM: catalase/peroxidase HPI PFAM: Haem peroxidase |
| [B] Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) | SYNP202379 | KATG_SYNP2 | Catalase/peroxidase HPI |
| [B] Synechococcus sp. (strain PCC 6301) | SYNP602426 | KATG_SYNP6 | catalase/peroxidase |
| [B] Burkholderia cenocepacia (strain AU 1054) | BURCA03128 | KATG2_BURCA | Peroxidase/catalase |
| [B] Burkholderia cenocepacia (strain HI2424) | BURCH05158 | KATG2_BURCH | catalase/peroxidase HPI KEGG: bcn:Bcen_3169 catalase/peroxidase HPI TIGRFAM: catalase/peroxidase HPI PFAM: Haem peroxidase |
| [B] Burkholderia cenocepacia (strain MC0-3) | BURCC05008 | KATG2_BURCC | Peroxidase/catalase |
| [B] Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) | SHEDO01356 | KATG_SHEDO | Catalase/peroxidase HPI |
| [B] Vibrio parahaemolyticus | VIBPA03525 | KATG1_VIBPA | similar to GB:AAF05841.1 (AF197161) percent identity 81 in 714 aa catalase/peroxidase |