List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 234647

TIGRFAM: catalase/peroxidase HPI PFAM: Haem peroxidase
This group has 9 members: 9 [B]acteria
Fingerprint: NGWANSV

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)MYCS206053  UniProtKB/Swiss-Prot KATG1_MYCS2  Catalase/peroxidase HPI
[B] Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)MYCVP02880  UniProtKB/Swiss-Prot KATG2_MYCVP  catalase/peroxidase HPI KEGG: mbo:Mb1943c catalase-peroxidase-peroxynitritase T KatG TIGRFAM: catalase/peroxidase HPI PFAM: Haem peroxidase
[B] Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)SYNP202379  UniProtKB/Swiss-Prot KATG_SYNP2  Catalase/peroxidase HPI
[B] Synechococcus sp. (strain PCC 6301)SYNP602426  UniProtKB/Swiss-Prot KATG_SYNP6  catalase/peroxidase
[B] Burkholderia cenocepacia (strain AU 1054)BURCA03128  UniProtKB/Swiss-Prot KATG2_BURCA  Peroxidase/catalase
[B] Burkholderia cenocepacia (strain HI2424)BURCH05158  UniProtKB/Swiss-Prot KATG2_BURCH  catalase/peroxidase HPI KEGG: bcn:Bcen_3169 catalase/peroxidase HPI TIGRFAM: catalase/peroxidase HPI PFAM: Haem peroxidase
[B] Burkholderia cenocepacia (strain MC0-3)BURCC05008  UniProtKB/Swiss-Prot KATG2_BURCC  Peroxidase/catalase
[B] Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)SHEDO01356  UniProtKB/Swiss-Prot KATG_SHEDO  Catalase/peroxidase HPI
[B] Vibrio parahaemolyticusVIBPA03525  UniProtKB/Swiss-Prot KATG1_VIBPA  similar to GB:AAF05841.1 (AF197161) percent identity 81 in 714 aa catalase/peroxidase