List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 1476

hypothetical protein
This group has 8 members: 6 [E]ukaryota 2 [B]acteria
Fingerprint: NEYAKEI

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Magnaporthe griseaMAGGR10367  UniProtKB/TrEMBL A4QRE7  Magnaporthe grisea hypothetical protein
[E] Lodderomyces elongisporusLODEL01695  UniProtKB/TrEMBL A5DWG2  Lodderomyces elongisporus (LELG_01698.1) conserved hypothetical protein (translation)
[E] Laccaria bicolorLACBI08995   eu2.Lbscf0002g07530  jgi|Lacbi1|305695|eu2.Lbscf0002g07530
[E] Ustilago maydisUSTMA06403  UniProtKB/TrEMBL Q4P0F2  ustilago_maydis hypothetical protein
[E] Ostreococcus lucimarinusOSTLU04037  UniProtKB/TrEMBL A4S1U9  predicted protein go_component: cytoplasm; go_function: tRNA ligase activity; ATP binding; nucleic acid binding; go_process: tRNA aminoacylation for protein translation; protein biosynthesis
[E] Populus trichocarpaPOPTR13240  UniProtKB/TrEMBL B9HN33  jgi|Poptr1_1|557552|eugene3.00090812 [DNA did not match protein] [DNA partly invalid]
[B] Syntrophus aciditrophicus (strain SB)SYNAS00447  UniProtKB/Swiss-Prot SYD1_SYNAS  aspartyl-tRNA synthetase
[B] Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)SYNFM03281  UniProtKB/TrEMBL A0LNN6  aspartyl-tRNA synthetase TIGRFAM: aspartyl-tRNA synthetase PFAM: GAD domain protein; tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type KEGG: sat:SYN_02602 aspartyl-tRNA synthetase