List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 262877

identified by match to
This group has 6 members: 6 [B]acteria
Fingerprint: TAGMAYY

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)CHLSY01009  UniProtKB/TrEMBL B9LLV1  Putative uncharacterized protein
[B] Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)CHLAA00922  UniProtKB/TrEMBL A9WHR3  Putative uncharacterized protein
[B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)PSEF504152  UniProtKB/TrEMBL Q4K8X8  glycosyl hydrolase, putative
[B] Pseudomonas syringae (pv. tomato)PSESM03353  UniProtKB/TrEMBL Q87Z96  identified by match to PFAM protein family HMM PF00150 glycosyl hydrolase, family 5
[B] Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)PSE1403006  UniProtKB/TrEMBL Q48GU6  identified by match to protein family HMM PF00150 glycosyl hydrolase, family 5
[B] Pseudomonas syringae pv. syringae (strain B728a)PSEU203289  UniProtKB/TrEMBL Q4ZR84  Glycoside hydrolase, family 5