List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 48284

Succinate dehydrogenase or fumarate reductase
This group has 10 members: 10 [A]rchaea
Fingerprint: ISAEGGM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Pyrobaculum calidifontis (strain JCM 11548 / VA1)PYRCJ01368  UniProtKB/TrEMBL A3MVZ1  Succinate dehydrogenase or fumarate reductase, flavoprotein subunit
[A] Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)PYRIL00243  UniProtKB/TrEMBL A1RR45  Succinate dehydrogenase or fumarate reductase, flavoprotein subunit
[A] Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta)THENV00412  UniProtKB/TrEMBL B1YBY7  Succinate dehydrogenase or fumarate reductase, flavoprotein subunit
[A] Methanosphaera stadtmanae (strain DSM 3091)METST00175  UniProtKB/TrEMBL Q2NHN6  TfrA thiol:fumarate reductase, subunit A
[A] Methanococcus maripaludisMETMP01277  UniProtKB/TrEMBL Q6LXS1  Fumarate reductase/succinate dehydrogenase, flavoprotein subunit
[A] Methanococcus maripaludis (strain C5 / ATCC BAA-1333)METM500313  UniProtKB/TrEMBL A4FWQ6  Succinate dehydrogenase
[A] Methanococcus maripaludis (strain C6 / ATCC BAA-1332)METM601383  UniProtKB/TrEMBL A9AA37  Succinate dehydrogenase
[A] Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)METLZ00139  UniProtKB/TrEMBL A2SPR1  Thiamine-phosphate kinase
[A] Pyrococcus furiosusPYRFU01963  UniProtKB/Swiss-Prot NADB_PYRFU  L-aspartate oxidase
[A] Pyrococcus horikoshiiPYRHO00019  UniProtKB/Swiss-Prot NADB_PYRHO  L-aspartate oxidase