List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 48284
Succinate dehydrogenase or fumarate reductase
This group has 10 members: 10 [A]rchaea
Fingerprint: ISAEGGM
| [A] Pyrobaculum calidifontis (strain JCM 11548 / VA1) | PYRCJ01368 | A3MVZ1 | Succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
| [A] Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) | PYRIL00243 | A1RR45 | Succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
| [A] Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) | THENV00412 | B1YBY7 | Succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
| [A] Methanosphaera stadtmanae (strain DSM 3091) | METST00175 | Q2NHN6 | TfrA thiol:fumarate reductase, subunit A |
| [A] Methanococcus maripaludis | METMP01277 | Q6LXS1 | Fumarate reductase/succinate dehydrogenase, flavoprotein subunit |
| [A] Methanococcus maripaludis (strain C5 / ATCC BAA-1333) | METM500313 | A4FWQ6 | Succinate dehydrogenase |
| [A] Methanococcus maripaludis (strain C6 / ATCC BAA-1332) | METM601383 | A9AA37 | Succinate dehydrogenase |
| [A] Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) | METLZ00139 | A2SPR1 | Thiamine-phosphate kinase |
| [A] Pyrococcus furiosus | PYRFU01963 | NADB_PYRFU | L-aspartate oxidase |
| [A] Pyrococcus horikoshii | PYRHO00019 | NADB_PYRHO | L-aspartate oxidase |