List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 127239

glycosyl transferase
This group has 5 members: 5 [B]acteria
Fingerprint: SAMERNT

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacteroides thetaiotaomicronBACTN02831  UniProtKB/TrEMBL Q8A3U0  Putative glycosyltransferase (Family 4) involved in lipopolysaccharide biosynthesis
[B] Nitrobacter hamburgensis (strain X14 / DSM 10229)NITHX02615  UniProtKB/TrEMBL Q1QJP3  glycosyl transferase, group 1
[B] Rhodopseudomonas palustris (strain BisB18)RHOPB04128  UniProtKB/TrEMBL Q20YQ6  glycosyl transferase, group 1
[B] Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875)METFK01128  UniProtKB/TrEMBL Q1H1U4  glycosyl transferase, group 1
[B] Myxococcus xanthus (strain DK 1622)MYXXD00981  UniProtKB/TrEMBL Q1DDI6  glycosyl transferase, group 1 family protein identified by match to protein family HMM PF00534