List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 69558

family 28
This group has 7 members: 7 [B]acteria
Fingerprint: NAPIFLR

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)ACIC500263  UniProtKB/TrEMBL C1F9C0  Putative uncharacterized protein
[B] Solibacter usitatus (strain Ellin6076)SOLUE04744  UniProtKB/TrEMBL Q01X09  glycoside hydrolase, family 28 PFAM: glycoside hydrolase, family 28 KEGG: bth:BT4146 exo-poly-alpha-D-galacturonosidase precursor
[B] Bacteroides thetaiotaomicronBACTN04100  UniProtKB/TrEMBL Q8A075  Exo-poly-alpha-D-galacturonosidase
[B] Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)BACV800180  UniProtKB/TrEMBL A6KWV0  Glycoside hydrolase family 28
[B] Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ103093  UniProtKB/TrEMBL A5FF90  Glycoside hydrolase, family 28
[B] Caulobacter crescentusCAUCR00567  UniProtKB/TrEMBL Q9AAM5  Putative uncharacterized protein
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP01166  UniProtKB/TrEMBL B1ZNM4  Glycoside hydrolase family 28