List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 30471
This group has 2 members: 2 [B]acteria
Fingerprint: NANDNST
| [B] Streptomyces coelicolor | STRCO06968 |  Q9L040 | SC1H10.04c, possible secreted glycosyl hydrolase, len: 1433 aa. Identical to Streptomyces lividans TR:P75020(EMBL:U22894) chitinase homolog found within the 4.7 kb amplifiable unit of the AUD1 element (1433 aa), fasta scores opt: 9322 z-score: 9526.2 E():0 99.5% identity in 1433 aa overlap. C-terminal similar to TR:BAB62749 (EMBL:AB055506) mycodextranase from Streptomyces sp. J-13-3 fasta scores; opt: 865, Z-score: 887.6, 32.953% identity (36.861% ungapped) in 613 aa overlap. Also weakly similar, in parts, to Bacillus circulans SW:CHI1_BACCI(EMBL:M57601) chitinase A1 precursor (EC 3.2.1.14) (699 aa), fasta scores opt: 497 z-score: 507.9 E(): 7.2e-21 47.3% identity in 182 aa overlap. Contains a possible N-terminal signal sequence and 2x Pfam matches to entries PF00041 fn3, Fibronectin type III domain. putative secreted glycosyl hydrolase |
| [B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) | STRGG06495 | B1VLR0 | Putative membrane protein |
fasta,