List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 243935

glycosyl hydrolase
This group has 6 members: 6 [B]acteria
Fingerprint: YLYTTEM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG03084  UniProtKB/TrEMBL B1VL12  Putative glycosyl hydrolase
[B] Thermobifida fusca (strain YX)THEFY02121  UniProtKB/TrEMBL Q47N06  conserved hypothetical protein
[B] Bacillus clausii (strain KSM-K16)BACSK03366  UniProtKB/TrEMBL Q5WCJ6  glycosyl hydrolase
[B] Bacillus haloduransBACHD00233  UniProtKB/TrEMBL Q9KG76  BH0236 unknown conserved protein in others
[B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237)CLOTH00632  UniProtKB/TrEMBL A3DD66  Glycoside hydrolase, family 81
[B] Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)HALOH00399  UniProtKB/TrEMBL B8D1U7  Beta-1,3-glucanase