| [B] Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) | MYCA903672 | B1MG32 | Error-prone DNA polymerase |
| [B] Mycobacterium avium (strain 104) | MYCA104086 | A0QKN3 | DNA polymerase III, alpha subunit, putative identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594 |
| [B] Mycobacterium paratuberculosis | MYCPA03443 | DNAE2_MYCPA | DnaE2 |
| [B] Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | MYCS201513 | A0QSX1 | DNA polymerase III, alpha subunit, putative |
| [B] Mycobacterium sp. (strain JLS) | MYCSJ01197 | A3PVT6 | DNA polymerase III, alpha subunit KEGG: mmc:Mmcs_1183 DNA polymerase III, alpha subunit TIGRFAM: DNA polymerase III, alpha subunit PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type SMART: phosphoesterase PHP domain protein |
| [B] Mycobacterium sp. (strain KMS) | MYCSK01187 | A1UC54 | DNA polymerase III, alpha subunit KEGG: mmc:Mmcs_1183 DNA polymerase III, alpha subunit TIGRFAM: DNA polymerase III, alpha subunit PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type SMART: phosphoesterase PHP domain protein |
| [B] Mycobacterium sp. (strain MCS) | MYCSS01166 | Q1BCT9 | DNA polymerase III, alpha subunit |
| [B] Mycobacterium bovis | MYCBO03394 | NP_857046.1 | Mb3405c, dnaE2, len: 1079 aa. Equivalent to Rv3370c, len: 1079 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 1079 aa overlap). Probable dnaE2, DNA polymerase III, alpha chain (EC 2.7.7.7), similar to many e.g. BAB51086|MLR4428 from Rhizobium loti (Mesorhizobium loti) (1118 aa), FASTA scores: opt: 1103, E(): 8.9e-59, (37.65% identity in 1075 aa overlap); Q9S291|SCI11.28c from Streptomyces coelicolor (1185 aa), FASTA scores: opt: 937, E(): 1e-48, (33.4% identity in 1090 aa overlap); O67125|DP3A_AQUAE|DNAE|AQ_1008 from Aquifex aeolicus (1161 aa), FASTA scores: opt: 895, E(): 3.4e-46, (29.9% identity in 1071 aa overlap); O51526|DP3A_BORBU from Borrelia burgdorferi (Lyme disease spirochete) (1147 aa), FASTA scores: opt: 835, E(): 1.4e-42, (30.05% identity in 888 aa overlap); etc. Equivalent to AAK47817 from Mycobacterium tuberculosis strain CDC1551 (1098 aa) but shorter 19 aa. Also similar to Mycobacterium tuberculosis DP3A_MYCTU|MTCY48.18c (29.6% identity in 1110 aa overlap). BELONGS TO DNA POLYMERASE TYPE-C FAMILY, DNAE SUBFAMILY. PROBABLE DNA POLYMERASE III (ALPHA CHAIN) DNAE2 (DNA NUCLEOTIDYLTRANSFERASE) |
| [B] Mycobacterium bovis (strain BCG / Paris 1173P2) | MYCBP03383 | A1KP63 | Probable dna polymerase III (Alpha chain) dnaE2 |
| [B] Mycobacterium tuberculosis | MYCTU04482 | DNAE2_MYCTU | Error-prone DNA polymerase |
| [B] Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) | MYCTA03435 | A5U844 | DNA polymerase III subunit alpha DnaE2 |
| [B] Mycobacterium tuberculosis (strain F11) | MYCTF03307 | A5WSU2 | DNA polymerase III (alpha chain) dnaE2 (DNA nucleotidyltransferase) Mapped to H37Rv Rv3370c |
| [B] Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) | MYCVP01469 | A1T5B1 | DNA polymerase III, alpha subunit KEGG: mmc:Mmcs_1183 DNA polymerase III, alpha subunit TIGRFAM: DNA polymerase III, alpha subunit PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type SMART: phosphoesterase PHP domain protein |
| [B] Nocardia farcinica | NOCFA00918 | DNAE2_NOCFA | putative DNA polymerase III alpha subunit |
| [B] Rhodococcus opacus (strain B4) | RHOOB06281 | C1B138 | Error-prone DNA polymerase |
| [B] Rhodococcus sp. (strain RHA1) | RHOSR06139 | Q0S382 | DNA-directed DNA polymerase alpha subunit |
| [B] Acidothermus cellulolyticus (strain ATCC 43068 / 11B) | ACIC100992 | A0LTK8 | DNA polymerase III, alpha subunit KEGG: mpa:MAP3476c DNA polymerase III, alpha subunit, putative TIGRFAM: DNA polymerase III, alpha subunit PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type SMART: phosphoesterase PHP domain protein |
| [B] Salinispora arenicola (strain CNS-205) | SALAI03315 | A8LY60 | DNA polymerase III, alpha subunit |
| [B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) | SALTO03177 | A4X9U2 | DNA polymerase III, alpha subunit |
| [B] Nocardioides sp. (strain BAA-499 / JS614) | NOCSJ01846 | A1SHX2 | DNA polymerase III, alpha subunit |
| [B] Propionibacterium acnes | PROAC01619 | DNAE2_PROAC | DNA polymerase III, alpha chain |
| [B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) | METSB01054 | B8ELP6 | DNA polymerase III, alpha subunit |
| [B] Bradyrhizobium japonicum | BRAJA02978 | DNAE2_BRAJA | Error-prone DNA polymerase |
| [B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) | BRASB02781 | A5EG17 | Error-prone DNA polymerase |
| [B] Rhodopseudomonas palustris | RHOPA01796 | DNAE2_RHOPA | putative DNA polymerase III alpha chain |
| [B] Rhodopseudomonas palustris (strain BisA53) | RHOP501801 | DNAE2_RHOP5 | DNA polymerase III, alpha subunit KEGG: rpb:RPB_3563 DNA polymerase III, alpha subunit TIGRFAM: DNA polymerase III, alpha subunit PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type SMART: phosphoesterase PHP domain protein |
| [B] Rhodopseudomonas palustris (strain BisB5) | RHOPS01894 | DNAE2_RHOPS | DNA polymerase III, alpha subunit |
| [B] Rhodopseudomonas palustris (strain HaA2) | RHOP203544 | DNAE2_RHOP2 | DNA polymerase III, alpha subunit |
| [B] Rhodopseudomonas palustris (strain TIE-1) | RHOPT01964 | B3QAJ2 | DNA polymerase III, alpha subunit |
| [B] Brucella abortus | BRUAB00064 | DNAE2_BRUAB | similar to BR0069, DNA polymerase III, alpha subunit DnaE-1, DNA polymerase III, alpha subunit |
| [B] Brucella abortus (strain 2308) | BRUA200066 | Q2YPR3 | Immunoglobulin/major histocompatibility complex:Phosphoesterase PHP, N-terminal:DNA polymerase III alpha subunit |
| [B] Brucella abortus (strain S19) | BRUA100061 | B2S7W9 | DNA polymerase III subunit alpha |
| [B] Brucella melitensis | BRUME01863 | DNAE2_BRUME | Error-prone DNA polymerase |
| [B] Brucella suis | BRUSU00068 | DNAE2_BRUSU | similar to SP:P33553, GB:Z12295, PID:1122400, PID:41062, PID:847971, and PID:1314251; identified by sequence similarity; putative DNA polymerase III, alpha subunit |
| [B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) | PARL102462 | A7HW57 | DNA polymerase III, alpha subunit precursor |
| [B] Hyphomonas neptunium (strain ATCC 15444) | HYPNA02423 | Q0BZD2 | Putative DNA polymerase III, alpha subunit |
| [B] Maricaulis maris (strain MCS10) | MARMM01825 | Q0ANL4 | DNA polymerase III, alpha subunit |
| [B] Paracoccus denitrificans (strain Pd 1222) | PARDP04177 | A1BA11 | DNA polymerase III, alpha subunit KEGG: jan:Jann_1558 DNA polymerase III, alpha subunit TIGRFAM: DNA polymerase III, alpha subunit PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type SMART: phosphoesterase PHP domain protein |
| [B] Silicibacter pomeroyi | SILPO00650 | DNAE2_SILPO | DNA polymerase III, alpha subunit, putative |
| [B] Erythrobacter litoralis (strain HTCC2594) | ERYLH01072 | Q2NAX1 | DNA polymerase III alpha chain COG0587 DNA polymerase III, alpha subunit |
| [B] Bordetella bronchiseptica | BORBR03072 | DNAE2_BORBR | ortholog of Bordetella pertussis (BX470248) BP2208 putative DNA polymerase III alpha chain |
| [B] Bordetella parapertussis | BORPA01628 | DNAE2_BORPA | ortholog of Bordetella pertussis (BX470248) BP2208 putative DNA polymerase III alpha chain |
| [B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) | BORPD02553 | A9IPK0 | DNA polymerase III, alpha subunit |
| [B] Burkholderia cenocepacia (strain AU 1054) | BURCA02190 | Q1BTE1 | DNA polymerase III, alpha subunit |
| [B] Burkholderia cenocepacia (strain MC0-3) | BURCC02809 | B1JYS3 | DNA polymerase III, alpha subunit |
| [B] Burkholderia cepacia (strain ATCC 53795 / AMMD) | BURCM02872 | Q0BBN1 | DNA polymerase III, alpha subunit KEGG: bur:Bcep18194_A6156 DNA polymerase III subunit alpha TIGRFAM: DNA polymerase III, alpha subunit PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type SMART: phosphoesterase PHP domain protein |
| [B] Burkholderia sp. (strain 383) | BURS302963 | Q39CR6 | DNA polymerase III, alpha subunit |
| [B] Burkholderia mallei | BURMA02628 | DNAE2_BURMA | Error-prone DNA polymerase |
| [B] Burkholderia mallei (strain NCTC 10229) | BURM901395 | A2S688 | DNA polymerase III, alpha subunit, form 2 |
| [B] Burkholderia mallei (strain NCTC 10247) | BURM702712 | A3MQ87 | DNA polymerase III, alpha subunit |
| [B] Burkholderia mallei (strain SAVP1) | BURMS00093 | A1UZR2 | DNA polymerase III, alpha subunit, form 2 |
| [B] Burkholderia phymatum (strain DSM 17167 / STM815) | BURP801951 | B2JDI9 | DNA polymerase III, alpha subunit |
| [B] Burkholderia pseudomallei | BURPS00471 | DNAE2_BURPS | Similar to Escherichia coli DNA polymerase III alpha subunit DnaE or PolC SWALL:DP3A_ECOLI (SWALL:P10443) (1160 aa) fasta scores: E(): 2.9e-58, 29.63% id in 1080 aa, and to Ralstonia solanacearum probable DNA polymerase III rsp0800 or rs01907 SWALL:Q8XRN1 (EMBL:AL646080) (1075 aa) fasta scores: E(): 0, 57.71% id in 1076 aa putative DNA polymerase III alpha subunit |
| [B] Burkholderia pseudomallei (strain 1106a) | BURP000520 | A3NR39 | DNA polymerase III, alpha subunit |
| [B] Burkholderia pseudomallei (strain 1710b) | BURP100678 | Q3JWE7 | DNA polymerase III, alpha subunit, form 2 identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594 |
| [B] Burkholderia pseudomallei (strain 668) | BURP600507 | A3N5E2 | DNA polymerase III, alpha subunit |
| [B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) | BURTA00437 | Q2T1E6 | DNA polymerase III, alpha subunit superfamily identified by match to protein family HMM PF02231; match to protein family HMM PF07733; match to protein family HMM TIGR00594 |
| [B] Acidovorax sp. (strain JS42) | ACISJ01817 | A1W7C2 | DNA polymerase III, alpha subunit KEGG: rfr:Rfer_1227 DNA polymerase III, alpha subunit TIGRFAM: DNA polymerase III, alpha subunit PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type SMART: phosphoesterase PHP domain protein |
| [B] Delftia acidovorans (strain DSM 14801 / SPH-1) | DELAS04171 | A9BLV3 | DNA polymerase III, alpha subunit |
| [B] Diaphorobacter sp. (strain TPSY) | DIAST01722 | B9MJ86 | DNA polymerase III, alpha subunit |
| [B] Polaromonas naphthalenivorans (strain CJ2) | POLNA04581 | A1VWD2 | DNA polymerase III, alpha subunit |
| [B] Polaromonas sp. (strain JS666 / ATCC BAA-500) | POLSJ02335 | Q12AY3 | DNA polymerase III, alpha subunit |
| [B] Methylibium petroleiphilum (strain PM1) | METPP04327 | A2SP94 | DNA-directed DNA polymerase |
| [B] Azoarcus sp. (strain EbN1) | AZOSE01688 | DNAE2_AZOSE | similar to DNA polymerase III alpha chain |
| [B] Dechloromonas aromatica (strain RCB) | DECAR01910 | DNAE2_DECAR | DNA polymerase III, alpha subunit |
| [B] Anaeromyxobacter sp. (strain Fw109-5) | ANADF02177 | A7HCF6 | DNA polymerase III, alpha subunit |
| [B] Myxococcus xanthus (strain DK 1622) | MYXXD03817 | Q1D5B1 | DNA polymerase III, alpha subunit identified by similarity to SP:O34623; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594 |
| [B] Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) | ACIF201752 | B7JBX3 | DNA polymerase III, alpha subunit, putative |
| [B] Acidithiobacillus ferrooxidans (strain ATCC 53993) | ACIF501463 | B5EJ94 | DNA polymerase III, alpha subunit |
| [B] Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) | MARAV00920 | A1TZA0 | DNA polymerase III, alpha subunit KEGG: mca:MCA2164 DNA polymerase III, alpha subunit, putative TIGRFAM: DNA polymerase III, alpha subunit PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type SMART: phosphoesterase PHP domain protein |
| [B] Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) | SACD201020 | DNAE2_SACD2 | Pantoate-beta-alanine ligase |
| [B] Idiomarina loihiensis | IDILO02534 | DNAE2_IDILO | DNA polymerase III alpha subunit |
| [B] Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) | SHEAM01852 | A1S6R2 | DNA-directed DNA polymerase KEGG: vpa:VP2036 putative DNA polymerase III alpha chain |
| [B] Shewanella loihica (strain BAA-1088 / PV-4) | SHELP02090 | A3QER8 | DNA polymerase III, alpha subunit KEGG: ilo:IL2566 DNA polymerase III alpha subunit TIGRFAM: DNA polymerase III, alpha subunit PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type SMART: phosphoesterase PHP domain protein |
| [B] Shewanella piezotolerans (strain WP3 / JCM 13877) | SHEPW02203 | B8CNV1 | DNA polymerase III alpha subunit |
| [B] Pseudomonas aeruginosa | PSEAE00669 | DNAE2_PSEAE | Error-prone DNA polymerase |
| [B] Pseudomonas aeruginosa (strain LESB58) | PSEA804633 | B7UZ59 | Probable DNA polymerase alpha chain |
| [B] Pseudomonas aeruginosa (strain PA7) | PSEA704752 | DNAE2_PSEA7 | Error-prone DNA polymerase |
| [B] Pseudomonas aeruginosa (strain UCBPP-PA14) | PSEAB04464 | Q02HG1 | conserved hypothetical protein |
| [B] Pseudomonas entomophila (strain L48) | PSEE402220 | Q1IAU4 | probable DNA polymerase III, alpha subunit Evidence 2b : Function of strongly homologous gene; Product type e : enzyme |
| [B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) | PSEF503646 | DNAE2_PSEF5 | identified by match to protein family HMM PF01336; match to protein family HMM PF02231; match to protein family HMM PF07733; match to protein family HMM TIGR00594 DNA polymerase III, alpha subunit, putative |
| [B] Pseudomonas fluorescens (strain PfO-1) | PSEPF03137 | DNAE2_PSEPF | DNA polymerase III, alpha subunit |
| [B] Pseudomonas mendocina (strain ymp) | PSEMY01903 | DNAE2_PSEMY | Error-prone DNA polymerase |
| [B] Pseudomonas putida (strain F1 / ATCC 700007) | PSEP102551 | A5W3M3 | DNA polymerase III, alpha subunit |
| [B] Pseudomonas putida (strain GB-1) | PSEPG02711 | B0KTE8 | DNA polymerase III, alpha subunit unknown EC_number=2.7.7.7 KEGG: pen:PSEEN2415 probable DNA polymerase III, alpha subunit TIGRFAM: DNA polymerase III, alpha subunit PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit SMART: phosphoesterase PHP domain protein |
| [B] Pseudomonas putida (strain KT2440) | PSEPK03079 | DNAE2_PSEPK | similar to GP:9946548; identified by sequence similarity; putative DNA polymerase III, alpha subunit, putative |
| [B] Pseudomonas putida (strain W619) | PSEPW02421 | B1J826 | DNA polymerase III, alpha subunit |
| [B] Pseudomonas syringae (pv. tomato) | PSESM02660 | DNAE2_PSESM | DNA polymerase III, alpha subunit, putative |
| [B] Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) | PSE1402496 | DNAE2_PSE14 | identified by match to protein family HMM PF01336; match to protein family HMM PF02231; match to protein family HMM PF07733; match to protein family HMM TIGR00594 DNA polymerase III, alpha subunit, putative |
| [B] Pseudomonas syringae pv. syringae (strain B728a) | PSEU202508 | DNAE2_PSEU2 | DNA polymerase III alpha subunit |
| [B] Vibrio harveyi (strain ATCC BAA-1116 / BB120) | VIBHB02522 | DNAE2_VIBHB | Putative uncharacterized protein |
| [B] Vibrio vulnificus | VIBVU02715 | DNAE2_VIBVU | COG0587 DNA polymerase III, alpha subunit |
| [B] Vibrio vulnificus (strain YJ016) | VIBVY01288 | DNAE2_VIBVY | Error-prone DNA polymerase |
| [B] Xanthomonas axonopodis (pv. citri) | XANAC01163 | NP_641535.1 | identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark DNA polymerase III alpha chain |
| [B] Xanthomonas campestris pv. campestris | XANCP01071 | DNAE2_XANCP | Error-prone DNA polymerase |
| [B] Xanthomonas campestris pv. campestris (strain 8004) | XANC803049 | AAY50192.1 | DNA polymerase III alpha chain |
| [B] Xanthomonas campestris pv. campestris (strain B100) | XANCB03226 | DNAE2_XANCB | DnaE1 protein |
| [B] Xanthomonas campestris pv. vesicatoria (strain 85-10) | XANC501199 | DNAE2_XANC5 | DNA polymerase III alpha chain protein |
| [B] Xanthomonas oryzae (pv. oryzae) | XANOR03079 | DNAE2_XANOR | identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark DNA polymerase III alpha chain |
| [B] Xanthomonas oryzae pv. oryzae (strain MAFF 311018) | XANOM02971 | Q2P0D3 | DNA polymerase III alpha chain identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker |
| [B] Xanthomonas oryzae pv. oryzae (strain PXO99A) | XANOP03229 | DNAE2_XANOP | Error-prone DNA polymerase |