List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 47782

glutamate decarboxylase
This group has 16 members: 5 [E]ukaryota 11 [B]acteria
Fingerprint: HQLVIHI

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Botrytis cinereaBOTFB06163  UniProtKB/TrEMBL A6RNS2  Botrytis cinerea hypothetical protein
[E] Magnaporthe griseaMAGGR02054  UniProtKB/TrEMBL Q5G592  Magnaporthe grisea hypothetical protein similar to glutamic acid decarboxylase
[E] Oryza sativaORYSA09241   BAF13013.1  Glutamate decarboxylase isozyme 1 (EC 4.1.1.15) contains InterPro domain(s): IPR002129, IPR010107 has GO asignment(s): GO:0006520, GO:0016831 similar to Q9AT17 supported by AK101171
[E] Sorghum bicolorSORBI12151   4868139  jgi|Sorbi1|4868139|estExt_Genewise1Plus.C_chr_12000
[E] Arabidopsis thalianaARATH21905  UniProtKB/Swiss-Prot DCE1_ARATH  glutamate decarboxylase 1 (GAD 1), sp|Q42521; go_component: chloroplast [goid GO:0009507] [evidence IEA]; go_function: calmodulin binding [goid GO:0005516] [evidence IEP] [pmid 11782485]; go_function: calmodulin binding [goid GO:0005516] [evidence TAS] [pmid 11782485]; go_function: glutamate decarboxylase activity [goid GO:0004351] [evidence IDA] [pmid 9700069]; go_function: calmodulin binding [goid GO:0005516] [evidence IDA] [pmid 9700069]; go_process: amino acid metabolism [goid GO:0006520] [evidence IEA]; go_process: glutamate decarboxylation to succinate [goid GO:0006540] [evidence IEA] GAD; calmodulin binding
[B] Rhodococcus erythropolis (strain PR4 / NBRC 100887)RHOE403530  UniProtKB/TrEMBL C1A0W1  Glutamate decarboxylase
[B] Arthrobacter aurescens (strain TC1)ARTAT03792  UniProtKB/TrEMBL A1RBN1  Glutamate decarboxylase
[B] Bacillus cereus (strain ATCC 10987)BACC102659  UniProtKB/TrEMBL Q737F8  identified by similarity to SP:P80063; match to protein family HMM PF00282; match to protein family HMM TIGR01788 glutamate decarboxylase
[B] Listeria innocuaLISIN02500  UniProtKB/Swiss-Prot DCEC_LISIN  highly similar to glutamate decarboxylases
[B] Listeria monocytogenesLISMO02430  UniProtKB/Swiss-Prot DCEC_LISMO  highly similar to glutamate decarboxylases
[B] Listeria monocytogenes (serotype 4b / strain F2365)LISMF02379  UniProtKB/TrEMBL Q71WZ4  identified by similarity to SP:Q8Y4K4; match to protein family HMM PF00282; match to protein family HMM TIGR01788 glutamate decarboxylase gamma
[B] Listeria monocytogenes serotype 4a (strain HCC23)LISMH00163  UniProtKB/TrEMBL B8DDC4  Glutamate decarboxylase
[B] Listeria monocytogenes serotype 4b (strain Clip81459)LISMC02364  UniProtKB/TrEMBL C1KY72  Putative glutamate decarboxylase
[B] Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)LISW602376  UniProtKB/TrEMBL A0ALB7  GadB protein
[B] Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)RALME01738  UniProtKB/TrEMBL Q1LMI1  glutamate decarboxylase
[B] Desulfotalea psychrophilaDESPS00385  UniProtKB/TrEMBL Q6ARB0  probable glutamate decarboxylase