List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 276916

Protein of unknown function
This group has 4 members: 4 [E]ukaryota
Fingerprint: MATIDEV

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Oryza sativaORYSA18515   BAF22425.1  Protein of unknown function DUF563 family protein ab initio prediction with EST support contains InterPro domain(s): IPR007657
[E] Sorghum bicolorSORBI21733  UniProtKB/TrEMBL C5X460  jgi|Sorbi1|5000957|estExt_fgenesh1_pg.C_chr_23896
[E] Arabidopsis thalianaARATH11933  UniProtKB/TrEMBL Q9SS43  expressed protein, contains Pfam domain, PF04577: Protein of unknown function (DUF563); go_component: cellular component unknown [goid GO:0005575@[ND]; GO:0008150@[ND]; GO:0016757@[IEA]; GO:0008372@[NR]] [evidence ND]; go_function: molecular function unknown [goid GO:0005554] [evidence ND]; go_process: biological process unknown [goid GO:0000004] [evidence ND] unknown protein
[E] Vitis viniferaVITVI04504  UniProtKB/TrEMBL A7PWI5