List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 234045
family 31
This group has 7 members: 7 [B]acteria
Fingerprint: MASKVED
| [B] Listeria innocua | LISIN02512 | Q928J2 | similar to glycosidase |
| [B] Listeria monocytogenes | LISMO02442 | Q8Y4J2 | similar to glycosidase |
| [B] Listeria monocytogenes (serotype 4b / strain F2365) | LISMF02393 | Q71WY0 | identified by match to protein family HMM PF01055; match to protein family HMM PF03422; match to protein family HMM TIGR01612 glycosyl hydrolase, family 31 |
| [B] Listeria monocytogenes serotype 4a (strain HCC23) | LISMH00149 | B8DDB0 | Glycosyl hydrolase, family 31 |
| [B] Listeria monocytogenes serotype 4b (strain Clip81459) | LISMC02377 | C1KY85 | Putative glycosidase |
| [B] Stenotrophomonas maltophilia (strain K279a) | STRMK04155 | B2FLK6 | Putative glycosyl hydrolase precursor |
| [B] Stenotrophomonas maltophilia (strain R551-3) | STRM503795 | B4SM68 | Glycoside hydrolase family 31 |