List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
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The close groups are made of the set of all
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Note that not all pairs of proteins coming
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were the case, the two groups would have
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Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
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proteins that have complementary function
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This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
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The fingerprint is a subsequence that is specific to a
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OMA

Keyword Protein Sequence Group Entry

OMA Group 25310

Peptide deformylase
This group has 17 members: 17 [B]acteria
Fingerprint: EFLAIVM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Corynebacterium efficiensCOREF01673  UniProtKB/Swiss-Prot DEF1_COREF  similar to AL583923-164|CAC30884.1| percent identity: 42 in 166 aa putative polypeptide deformylase
[B] Corynebacterium glutamicumCORGL02207  UniProtKB/Swiss-Prot DEF1_CORGL  Peptide deformylase 1
[B] Corynebacterium glutamicum (strain R)CORGB01678  UniProtKB/TrEMBL A4QEH5  Hypothetical protein
[B] Dehalococcoides ethenogenes (strain 195)DEHE100659  UniProtKB/Swiss-Prot DEF_DEHE1  identified by similarity to SP:P94462; match to protein family HMM PF01327; match to protein family HMM TIGR00079 peptide deformylase
[B] Dehalococcoides sp. (strain BAV1)DEHSB00665  UniProtKB/Swiss-Prot DEF_DEHSB  Peptide deformylase
[B] Dehalococcoides sp. (strain CBDB1)DEHSC00615  UniProtKB/Swiss-Prot DEF_DEHSC  polypeptide deformylase
[B] Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)PELTS01772  UniProtKB/Swiss-Prot DEF_PELTS  Peptide deformylase
[B] Ehrlichia chaffeensis (strain Arkansas)EHRCR00068  UniProtKB/TrEMBL Q2GI30  peptide deformylase identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079
[B] Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)AERHH02313  UniProtKB/TrEMBL A0KKU5  peptide deformylase identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079
[B] Colwellia psychrerythraea (strain 34H / ATCC BAA-681)COLP300366  UniProtKB/TrEMBL Q489U9  identified by similarity to SP:P27251; match to protein family HMM PF01327; match to protein family HMM TIGR00079 polypeptide deformylase
[B] Shewanella loihica (strain BAA-1088 / PV-4)SHELP02093  UniProtKB/TrEMBL A3QES1  peptide deformylase KEGG: son:SO2530 polypeptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase
[B] Shewanella oneidensisSHEON02365  UniProtKB/Swiss-Prot DEF3_SHEON  Peptide deformylase 3
[B] Shewanella sp. (strain ANA-3)SHESA02290  UniProtKB/TrEMBL A0KXM9  peptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase KEGG: son:SO2530 polypeptide deformylase
[B] Halorhodospira halophila (strain DSM 244 / SL1)HALHL02289  UniProtKB/TrEMBL A1WZH4  Peptide deformylase
[B] Vibrio parahaemolyticusVIBPA03855  UniProtKB/Swiss-Prot DEF2_VIBPA  similar to GB:AAF96063.1 (AE004356) percent identity 75 in 168 aa polypeptide deformylase
[B] Vibrio vulnificusVIBVU03713  UniProtKB/Swiss-Prot DEF2_VIBVU  COG0242 N-formylmethionyl-tRNA deformylase
[B] Vibrio vulnificus (strain YJ016)VIBVY04555  UniProtKB/Swiss-Prot DEF1_VIBVY  Peptide deformylase 1