List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 200783

3-dehydroquinate synthase
This group has 10 members: 4 [E]ukaryota 6 [B]acteria
Fingerprint: PIYIGAG

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Oryza sativaORYSA21754   BAF25716.1  3-dehydroquinate synthase domain containing protein contains InterPro domain(s): IPR002658 has GO asignment(s): GO:0003856, GO:0009073 supported by AK071977
[E] Sorghum bicolorSORBI32280  UniProtKB/TrEMBL C5X6V7  jgi|Sorbi1|5051554|Sb02g031240
[E] Arabidopsis thalianaARATH26336  UniProtKB/TrEMBL Q8VYV7  3-dehydroquinate synthase, putative, similar to aroB (Neisseria gonorrhoeae)(GI:2661441); contains 3-dehydroquinate synthase domain PF01761; go_component: chloroplast [goid GO:0003856@[IEA]; GO:0009073@[IEA]; GO:0009507@[NR]] [evidence IEA]; go_function: 3-dehydroquinate synthase activity [goid GO:0003856] [evidence IEA]; go_process: aromatic amino acid family biosynthesis [goid GO:0009073] [evidence IEA] 3-dehydroquinate synthase
[E] Vitis viniferaVITVI08689  UniProtKB/TrEMBL A7QDT9  
[B] Rhodococcus erythropolis (strain PR4 / NBRC 100887)RHOE402985  UniProtKB/Swiss-Prot AROB_RHOE4  3-dehydroquinate synthase
[B] Frankia sp. (strain CcI3)FRASC03110  UniProtKB/TrEMBL Q2J828  3-dehydroquinate synthase
[B] Frankia sp. (strain EAN1pec)FRASN01655  UniProtKB/TrEMBL A8LE04  3-dehydroquinate synthase
[B] Acidovorax avenae subsp. citrulli (strain AAC00-1)ACIAC00953  UniProtKB/TrEMBL A1TKW3  3-dehydroquinate synthase PFAM: 3-dehydroquinate synthase KEGG: pol:Bpro_0787 3-dehydroquinate synthase
[B] Hahella chejuensis (strain KCTC 2396)HAHCH05629  UniProtKB/TrEMBL Q2S9Q6  3-dehydroquinate synthase TIGRFAMsMatches:TIGR01357
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP04511  UniProtKB/Swiss-Prot AROB_OPITP  3-dehydroquinate synthase