List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 190733
Indole-3-glycerol phosphate synthase
This group has 6 members: 6 [B]acteria
Fingerprint: DPCQIYL
| [B] Corynebacterium diphtheriae | CORDI01509 | Q6NGG3 | Similar to Mycobacterium tuberculosis indole-3-glycerol phosphate synthase TrpC or Rv1611 or MT1646 or MTCY01B2.03 SW:TRPC_MYCTU (O06129) (272 aa) fasta scores: E(): 1.4e-52, 55.59% id in 268 aa, and to Streptomyces coelicolor indole-3-glycerol phosphate synthase 1 TrpC1 or TrpC or SC4G6.08c SW:TRC1_STRCO (O68814) (269 aa) fasta scores: E(): 1.1e-44, 48.28% id in 263 aa indole-3-glycerol phosphate synthase |
| [B] Frankia sp. (strain CcI3) | FRASC02920 | Q2J8L8 | Indole-3-glycerol-phosphate synthase |
| [B] Anabaena variabilis (strain ATCC 29413 / PCC 7937) | ANAVT04801 | Q3M3E7 | Indole-3-glycerol phosphate synthase |
| [B] Anabaena sp. (strain PCC 7120) | ANASP03203 | Q8YS56 | Indole-3-glycerol phosphate synthase |
| [B] Nostoc punctiforme (strain ATCC 29133 / PCC 73102) | NOSP704366 | B2J0A1 | Indole-3-glycerol phosphate synthase |
| [B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) | BEII901392 | TRPC_BEII9 | Indole-3-glycerol-phosphate synthase |