List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 350407

binding protein
This group has 21 members: 21 [B]acteria
Fingerprint: LTSKWHY

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacillus anthracisBACAN02564  UniProtKB/TrEMBL B0AK29  similar to GP:16411955; identified by sequence similarity; putative chitin binding protein, putative
[B] Bacillus cereus (strain AH187)BACC702653  UniProtKB/TrEMBL B7HTM6  Putative chitinase
[B] Bacillus cereus (strain ATCC 10987)BACC102791  UniProtKB/TrEMBL Q736S6  identified by match to protein family HMM PF00041; match to protein family HMM PF02839; match to protein family HMM PF03067 chitin binding protein, putative
[B] Bacillus cereus (strain ATCC 14579 / DSM 31)BACCR02631  UniProtKB/TrEMBL Q81CG6  Chitin binding protein
[B] Bacillus cereus (strain G9842)BACC202667  UniProtKB/TrEMBL B7IJL8  Putative chitinase
[B] Bacillus cereus (strain ZK)BACCZ02493  UniProtKB/TrEMBL Q63AF5  chitin-binding protein
[B] Bacillus cereus subsp. cytotoxis (strain NVH 391-98)BACCN02084  UniProtKB/TrEMBL A7GQQ4  Chitin-binding domain 3 protein precursor
[B] Bacillus thuringiensis (strain Al Hakam)BACAH02371  UniProtKB/TrEMBL A0RF04  chitin-binding protein
[B] Bacillus thuringiensis (subsp. konkukian)BACHK02506  UniProtKB/TrEMBL Q6HHU4  Structural feature(s) predicted by Psort:Transmembrane: 2637685 - 2637669 chitin-binding protein
[B] Bacillus weihenstephanensis (strain KBAB4)BACWK02531  UniProtKB/TrEMBL A9VIE0  Chitin-binding domain 3 protein
[B] Lysinibacillus sphaericus (strain C3-41)LYSSC03012  UniProtKB/TrEMBL B1HQ15  Chitin binding protein, putative
[B] Listeria innocuaLISIN02579  UniProtKB/TrEMBL Q928C5  similar to chitinase and chitin binding protein
[B] Listeria monocytogenesLISMO02463  UniProtKB/TrEMBL Q8Y4H4  similar to chitinase and chitin binding protein
[B] Listeria monocytogenes (serotype 4b / strain F2365)LISMF02413  UniProtKB/TrEMBL Q71WW0  identified by similarity to GP:3308998; match to protein family HMM PF00041; match to protein family HMM PF02839; match to protein family HMM PF03067 chitin-binding protein/carbohydrate-binding protein
[B] Listeria monocytogenes serotype 4a (strain HCC23)LISMH00127  UniProtKB/TrEMBL B8DBP3  Chitin-binding protein/carbohydrate-binding protein
[B] Listeria monocytogenes serotype 4b (strain Clip81459)LISMC02398  UniProtKB/TrEMBL C1KYN4  Putative chitinase and chitin binding protein
[B] Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)LISW602411  UniProtKB/TrEMBL A0ALF2  Chb protein
[B] Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599)BREBN05622  UniProtKB/TrEMBL C0Z8N4  Putative uncharacterized protein
[B] Yersinia pseudotuberculosis (serotype O:1b / strain IP 31758)YERP300593  UniProtKB/TrEMBL A7FEC4  Fibronectin type III domain protein, chitin binding domain protein
[B] Yersinia pseudotuberculosis serotype IB (strain PB1/+)YERPB03436  UniProtKB/TrEMBL B2K2C8  Fibronectin type III domain protein
[B] Yersinia pseudotuberculosis serotype O:3 (strain YPIII)YERPY00675  UniProtKB/TrEMBL B1JM71  Fibronectin type III domain protein