List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 206955

Arabinogalactan endo-1,4-beta-galactosidase
This group has 8 members: 8 [B]acteria
Fingerprint: LRVWNDP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bifidobacterium longumBIFLO00902  UniProtKB/TrEMBL Q8G7K7  Possible arabinogalactan endo-beta-galactosidase or galactanase
[B] Bifidobacterium longum (strain DJO10A)BIFLD00986  UniProtKB/TrEMBL B3DTI0  Arabinogalactan endo-1,4-beta-galactosidase
[B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT600687  UniProtKB/TrEMBL B5YDG6  Arabinogalactan endo-1,4-beta-galactosidase, putative
[B] Bacillus haloduransBACHD01987  UniProtKB/TrEMBL Q9KBA5  BH2023 unknown
[B] Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)THELT00906  UniProtKB/TrEMBL A8F5P5  Arabinogalactan endo-1,4-beta-galactosidase precursor
[B] Thermotoga maritimaTHEMA01185  UniProtKB/TrEMBL Q9X0S8  Arabinogalactan endo-1,4-beta-galactosidase, putative
[B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)THEP101531  UniProtKB/TrEMBL A5IMY9  Arabinogalactan endo-1,4-beta-galactosidase precursor
[B] Thermotoga sp. (strain RQ2)THESQ01590  UniProtKB/TrEMBL B1LCP4  Arabinogalactan endo-1,4-beta-galactosidase