List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 185088

Glycoside hydrolase family 43
This group has 5 members: 5 [B]acteria
Fingerprint: LIMLWSS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Arthrobacter aurescens (strain TC1)ARTAT01192  UniProtKB/TrEMBL A1R464  Putative glycosyl hydrolase, family 43
[B] Bacteroides thetaiotaomicronBACTN01859  UniProtKB/TrEMBL Q8A6K8  Endo-arabinase
[B] Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)BACV800472  UniProtKB/TrEMBL A6KXQ3  Glycoside hydrolase family 43
[B] Anaerocellum thermophilum (strain DSM 6725 / Z-1320)ANATD02258  UniProtKB/TrEMBL B9MNB0  Glycoside hydrolase family 43
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP03179  UniProtKB/TrEMBL B1ZN35  Glycoside hydrolase family 43 precursor