List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 36162
Oligosaccharyl transferase
This group has 8 members: 5 [E]ukaryota 3 [A]rchaea
Fingerprint: LAVHIRE
| [E] Leishmania braziliensis | LEIBR00834 | A4HMD5 | oligosaccharyl transferase-like protein |
| [E] Leishmania infantum | LEIIN00814 | A4IB09 | oligosaccharyl transferase-like protein previous systematic id LinJ35.0930 |
| [E] Trypanosoma brucei | TRYBB05709 | AAX70183.1 | go_component: oligosaccharyl transferase complex [goid 0008250]; go_component: integral to membrane [goid 0016021]; go_function: oligosaccharyl transferase activity [goid 0004576]; go_process: protein amino acid glycosylation [goid 0006486] oligosaccharyl transferase subunit, putative |
| [E] Oryza sativa | ORYSA12358 | Q259H1 | Oligosaccharyl transferase STT3 subunit homolog (B5) (Integral membrane protein 1) contains InterPro domain(s): IPR003674 has GO asignment(s): GO:0004576, GO:0006486, GO:0016020 similar to P46978 supported by AK067609 |
| [E] Sorghum bicolor | SORBI10618 | 4833969 | jgi|Sorbi1|4833969|e_gw1.6.16379.1 |
| [A] Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) | IGNH400016 | A8A8E8 | Uncharacterized membrane protein required for N- linked glycosylation-like protein |
| [A] Metallosphaera sedula (strain ATCC 51363 / DSM 5348) | METS501782 | A4YHQ7 | Oligosaccharyl transferase, STT3 subunit |
| [A] Pyrobaculum aerophilum | PYRAE02126 | Q8ZTY7 | Oligosaccharyl transferase STT3 homolog |