List of all proteins in the group
Allows comparison of IDs and descriptions
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Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
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The close groups are made of the set of all
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The "Phyletic profile" displays OMA groups
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proteins that have complementary function
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This function displays a table of all
Gene Ontology (GO) annotations on
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OMA

Keyword Protein Sequence Group Entry

OMA Group 195819

shikimate 5-dehydrogenase
This group has 29 members: 29 [B]acteria
Fingerprint: ANTLYYD

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)THERP02792  UniProtKB/TrEMBL B9L507  Shikimate 5-dehydrogenase
[B] Caulobacter crescentusCAUCR00003  UniProtKB/Swiss-Prot AROE_CAUCR  Shikimate dehydrogenase
[B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII903460  UniProtKB/TrEMBL B2IG55  Shikimate 5-dehydrogenase
[B] Nitrobacter hamburgensis (strain X14 / DSM 10229)NITHX01040  UniProtKB/Swiss-Prot AROE_NITHX  Shikimate 5-dehydrogenase
[B] Rhodopseudomonas palustrisRHOPA04306  UniProtKB/Swiss-Prot AROE_RHOPA  observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished putative shikimate 5-dehydrogenase
[B] Rhodopseudomonas palustris (strain BisB5)RHOPS03892  UniProtKB/Swiss-Prot AROE_RHOPS  shikimate 5-dehydrogenase
[B] Rhodopseudomonas palustris (strain HaA2)RHOP201299  UniProtKB/Swiss-Prot AROE_RHOP2  shikimate 5-dehydrogenase
[B] Rhodopseudomonas palustris (strain TIE-1)RHOPT04726  UniProtKB/Swiss-Prot AROE_RHOPT  Shikimate 5-dehydrogenase
[B] Brucella abortusBRUAB01912  UniProtKB/Swiss-Prot AROE_BRUAB  similar to BR2069, shikimate 5-dehydrogenase AroE, shikimate 5-dehydrogenase
[B] Brucella abortus (strain 2308)BRUA202055   CAJ12026.1  Shikimate/quinate 5-dehydrogenase:Shikimate 5-dehydrogenase
[B] Brucella abortus (strain S19)BRUA101848  UniProtKB/Swiss-Prot AROE_BRUA1  Shikimate 5-dehydrogenase
[B] Brucella canis (strain ATCC 23365 / NCTC 10854)BRUC201979  UniProtKB/Swiss-Prot AROE_BRUC2  Shikimate dehydrogenase
[B] Brucella melitensisBRUME02045  UniProtKB/Swiss-Prot AROE_BRUME  Shikimate dehydrogenase
[B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO201773  UniProtKB/Swiss-Prot AROE_BRUO2  Shikimate 5-dehydrogenase
[B] Brucella suisBRUSU01988   NP_699044.1  identified by match to TIGR protein family HMM TIGR00507 shikimate 5-dehydrogenase
[B] Brucella suis (strain ATCC 23445 / NCTC 10510)BRUSI01792  UniProtKB/Swiss-Prot AROE_BRUSI  shikimate 5-dehydrogenase GO_function: shikimate 5-dehydrogenase activity [GO ID 0004764]; GO_process: chorismate biosynthetic process [GO ID 0009423]
[B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB01448  UniProtKB/TrEMBL B1ZF82  Shikimate 5-dehydrogenase
[B] Mesorhizobium sp. (strain BNC1)MESSB03444  UniProtKB/Swiss-Prot AROE_MESSB  shikimate 5-dehydrogenase TIGRFAM: shikimate 5-dehydrogenase PFAM: Shikimate/quinate 5-dehydrogenase Shikimate dehydrogenase substrate binding-like KEGG: mlo:mlr4492 shikimate 5-dehydrogenase
[B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)PARL101197  UniProtKB/Swiss-Prot AROE_PARL1  Shikimate 5-dehydrogenase
[B] Rhizobium etli (strain CFN 42 / ATCC 51251)RHIEC00003  UniProtKB/Swiss-Prot AROE_RHIEC  shikimate 5-dehydrogenase protein similar to aroE1 (SMc02791) [Sinorhizobium meliloti], AGR_C_3p [Agrobacterium tumefaciens] andmlr4492 [Mesorhizobium loti] Similar to entrez-protein:Q92TF0 Putative location:bacterial cytoplasm Psort-Score: 0.1135; go_component: cytoplasm [goid 0005737]; go_function: oxidoreductase activity [goid 0016491]; go_function: shikimate 5-dehydrogenase activity [goid 0004764]; go_process: metabolism [goid 0008152]; go_process: aromatic amino acid family biosynthesis, shikimate pathway [goid 0016089]; go_process: aromatic amino acid family biosynthesis [goid 0009073]
[B] Rhizobium melilotiRHIME00003  UniProtKB/Swiss-Prot AROE_RHIME  Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE SHIKIMATE 5-DEHYDROGENASE PROTEIN
[B] Sinorhizobium medicae (strain WSM419)SINMW03151  UniProtKB/Swiss-Prot AROE_SINMW  Shikimate 5-dehydrogenase
[B] Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)XANP201768  UniProtKB/TrEMBL A7IGD1  Shikimate 5-dehydrogenase
[B] Silicibacter pomeroyiSILPO03789  UniProtKB/TrEMBL Q5LLN1  identified by similarity to SP:Q58484; match to protein family HMM PF01488; match to protein family HMM TIGR00507 shikimate 5-dehydrogenase
[B] Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)DESVH00115  UniProtKB/TrEMBL Q72FU8  identified by match to protein family HMM PF01488; match to protein family HMM TIGR00507 shikimate 5-dehydrogenase
[B] Desulfovibrio vulgaris subsp. vulgaris (strain DP4)DESVV02828  UniProtKB/TrEMBL A1VHE3  Shikimate 5-dehydrogenase
[B] Petrotoga mobilis (strain DSM 10674 / SJ95)PETMO01163  UniProtKB/TrEMBL A9BHP6  Shikimate dehydrogenase substrate binding domain protein
[B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)THEP100565  UniProtKB/Swiss-Prot AROE_THEP1  Shikimate dehydrogenase
[B] Thermotoga sp. (strain RQ2)THESQ00580  UniProtKB/Swiss-Prot AROE_THESQ  Shikimate dehydrogenase substrate binding domain protein