| [B] Acidobacteria bacterium (strain Ellin345) | ACIBL01121 | Q1ISM3 | Ribonucleoside-diphosphate reductase |
| [B] Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) | ACIC501502 | C1F6S8 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Solibacter usitatus (strain Ellin6076) | SOLUE01626 | Q028A2 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: aba:Acid345_1124 ribonucleoside-diphosphate reductase TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent |
| [B] Frankia alni (strain ACN14a) | FRAAA05565 | Q0RDY5 | Ribonucleoside-diphosphate reductase M1 chain (Vitamin B12-dependent ribonucleotide reductase) Evidence 2b : Function of strongly homologous gene; Product type e : enzyme |
| [B] Frankia sp. (strain EAN1pec) | FRASN01212 | A8L6K7 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Salinispora arenicola (strain CNS-205) | SALAI01372 | A8M7X7 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) | SALTO01431 | A4X4W9 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Propionibacterium acnes | PROAC01012 | Q6A8Y8 | ribonucleoside-diphosphate reductase alpha chain |
| [B] Streptomyces coelicolor | STRCO05770 | NRDJ_STRCO | SC4H2.26, nrdJ, ribonucleotide reductase, len: 967 aa; highly similar to Streptomyces clavuligerus TR:E1258368(EMBL:AJ224870) vitamin B12-dependent ribonucleotide reductase (951 aa), fasta scores; opt: 5800 z-score: 5797.4 E():0, 91.3% identity in 958 aa overlap. Contains 2x match to Pfam match to entry ribonucleo_red PF00317, Ribonucleotide reductase, scores 75.54 and 86.71 ribonucleotide reductase |
| [B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) | STRGG01588 | B1VXS8 | Putative vitamin B12-dependent ribonucleotide reductase |
| [B] Thermobifida fusca (strain YX) | THEFY02140 | Q47MY7 | ribonucleotide reductase large subunit |
| [B] Chlorobaculum parvum (strain NCIB 8327) | CHLP800589 | B3QM65 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Chlorobium tepidum | CHLTE00571 | Q8KEV4 | Ribonucleotide reductase family protein |
| [B] Chlorobium limicola (strain DSM 245 / NBRC 103803) | CHLL200520 | B3EGJ4 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Chlorobium phaeobacteroides (strain BS1) | CHLPB00752 | B3ENX4 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Chlorobium phaeobacteroides (strain DSM 266) | CHLPD01679 | A1BHC2 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: cte:CT0578 ribonucleotide reductase family protein TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent |
| [B] Prosthecochloris vibrioformis (strain DSM 265) | PROVI01179 | A4SFF2 | ribonucleoside-diphosphate reductase class II KEGG: cte:CT0578 ribonucleotide reductase family protein TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent |
| [B] Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) | PELPB00796 | B4SF17 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Prosthecochloris aestuarii (strain DSM 271 / SK 413) | PROA200694 | B4S6K8 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) | THERP01755 | B9L1R5 | B12-dependent ribonucleoside diphosphate reductase |
| [B] Clostridium acetobutylicum | CLOAB01036 | Q97K72 | Ribonucleotide reductase, vitamin B12-dependent |
| [B] Clostridium tetani | CLOTE00465 | Q897Z5 | ribonucleoside-diphosphate reductase (vitamin B12-dependent) |
| [B] Rhodopirellula baltica | RHOBA06968 | NRDJ_RHOBA | PMID: 8265664 best DB hits: BLAST: pir:T35125; ribonucleotide reductase - Streptomyces coelicolor -----; E=0.0 embl:CAA12167.1; (AJ224870) vitamin B12-dependent ribonucleotide; E=0.0 gb:AAD37499.1; AF111267_1 (AF111267) regulatory protein SCTI; E=1e-119 COG: AF1664; COG0209 Ribonucleotide reductase alpha subunit; E=2e-51 PFAM: PF02867; Ribonucleotide reductase, bar; E=0.0031 ribonucleotide reductase |
| [B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) | BEII901914 | B2IEI0 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) | METSB00179 | B8EN30 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Bradyrhizobium japonicum | BRAJA04222 | NRDJ_BRAJA | Vitamin B12-dependent ribonucleotide reductase |
| [B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) | BRASB03954 | A5EJE8 | Ribonucleotide reductase large subunit |
| [B] Bradyrhizobium sp. (strain ORS278) | BRASO03272 | A4YTN1 | Ribonucleotide reductase large subunit. |
| [B] Nitrobacter hamburgensis (strain X14 / DSM 10229) | NITHX01954 | Q1QLL6 | ribonucleotide reductase large subunit |
| [B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) | NITWN01480 | Q3SSA9 | ribonucleotide reductase large subunit |
| [B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) | OLICO02723 | B6JGY7 | B12-dependent ribonucleoside diphosphate reductase |
| [B] Rhodopseudomonas palustris | RHOPA02969 | Q6N5J7 | observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished ribonucleotide reductase |
| [B] Rhodopseudomonas palustris (strain BisA53) | RHOP502459 | Q07NP5 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent KEGG: rpc:RPC_2380 ribonucleotide reductase large subunit |
| [B] Rhodopseudomonas palustris (strain BisB18) | RHOPB02341 | Q215K3 | ribonucleotide reductase large subunit |
| [B] Rhodopseudomonas palustris (strain BisB5) | RHOPS02894 | Q135U9 | ribonucleotide reductase large subunit |
| [B] Rhodopseudomonas palustris (strain HaA2) | RHOP202534 | Q2IX12 | Ribonucleoside diphosphate reductase, B12-dependent |
| [B] Rhodopseudomonas palustris (strain TIE-1) | RHOPT03262 | B3Q7R1 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Brucella abortus | BRUAB00968 | C4IQW3 | similar to BR1043, ribonucleotide reductase domain protein ribonucleotide reductase domain protein |
| [B] Brucella abortus (strain 2308) | BRUA201051 | Q2YQ30 | Ribonucleotide reductase large subunit |
| [B] Brucella abortus (strain S19) | BRUA100933 | B2S5Q4 | Ribonucleotide reductase large subunit |
| [B] Brucella canis (strain ATCC 23365 / NCTC 10854) | BRUC200993 | A9MB55 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Brucella melitensis | BRUME00938 | D0B382 | VITAMIN B12-DEPENDENT RIBONUCLEOTIDE REDUCTASE |
| [B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) | BRUO200903 | A5VQI3 | B12-dependent ribonucleoside diphosphate reductase |
| [B] Brucella suis | BRUSU01001 | Q8G0P6 | similar to GP:15074488; identified by sequence similarity; putative ribonucleotide reductase domain protein |
| [B] Brucella suis (strain ATCC 23445 / NCTC 10510) | BRUSI01019 | B0CGJ3 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent GO_function: class II ribonucleotide reductase activity [GO ID 0016960] |
| [B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) | OCHA402105 | A6X0U3 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) | METC401138 | B7KQ83 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: mex:Mext_1102 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent |
| [B] Methylobacterium extorquens (strain PA1) | METEP01073 | A9W1Q0 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Methylobacterium nodulans (strain ORS2060 / LMG 21967) | METNO05688 | B8IU05 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) | METPB01007 | B1ZAX5 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) | METRJ00300 | B1LS79 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Methylobacterium sp. (strain 4-46) | METS400277 | B0UGP4 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Mesorhizobium sp. (strain BNC1) | MESSB01323 | Q11IP7 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit Ribonucleotide reductase class II vitamin B12-dependent KEGG: mlo:mll0136 ribonucleoside-diphosphate reductase alpha chain |
| [B] Rhizobium loti | RHILO00104 | Q98NH6 | ribonucleotide reductase |
| [B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) | PARL103224 | A7HYC1 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868) | AGRRK01534 | B9JEB5 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Agrobacterium tumefaciens (strain C58 / ATCC 33970) | AGRT501689 | NRDJ_AGRT5 | Vitamin B12-dependent ribonucleotide reductase |
| [B] Rhizobium etli (strain CFN 42 / ATCC 51251) | RHIEC01706 | Q2K9D8 | ribonucleotide-diphosphate reductase protein similar to nrd (SMc01237) [Sinorhizobium meliloti] Similar to swissprot:Q92Q05 Putative location:bacterial cytoplasm Psort-Score: 0.2640; go_component: ribonucleoside-diphosphate reductase complex [goid 0005971]; go_function: ribonucleoside-diphosphate reductase activity [goid 0004748]; go_process: DNA replication [goid 0006260] |
| [B] Rhizobium etli (strain CIAT 652) | RHIE601809 | B3PX11 | Putative ribonucleotide-diphosphate reductase protein |
| [B] Rhizobium leguminosarum bv. trifolii (strain WSM2304) | RHILW01398 | B5ZZB4 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Rhizobium leguminosarum bv. viciae (strain 3841) | RHIL301946 | Q1MHX2 | putative vitamin B12-dependent ribonucleotide reductase similarity:fasta; with=UniProt:O54196_STRCL (EMBL:SCAJ4870); Streptomyces clavuligerus.; nrdJ; Vitamin B12-dependent ribonucleotide reductase.; length=961; id 34.087; 1282 aa overlap; query 1-1271; subject 23-961 similarity:fasta; with=UniProt:Q8UEM4_AGRT5 (EMBL:AE008094); Agrobacterium tumefaciens (strain C58/ATCC 33970).; nrdE; Ribonucleoside-diphosphate reductase 2 alpha chain (AGR_C_3183p).; length=1272; id 88.941; 1275 aa overlap; query 1-1271; subject 1-1272 |
| [B] Rhizobium meliloti | RHIME01536 | Q92Q05 | Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE RIBONUCLEOTIDE REDUCTASE PROTEIN |
| [B] Sinorhizobium medicae (strain WSM419) | SINMW01209 | A6U8V3 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) | AZOC501263 | A8I0K3 | Ribonucleotide reductase large subunit |
| [B] Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) | XANP204573 | A7IPE8 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Dinoroseobacter shibae (strain DFL 12) | DINSH01769 | A8LMI2 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Jannaschia sp. (strain CCS1) | JANSC02464 | Q28PH3 | Ribonucleoside-diphosphate reductase |
| [B] Paracoccus denitrificans (strain Pd 1222) | PARDP01320 | A1B1U1 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: rsp:RSP_2495 ribonucleotide-diphosphate reductase alpha subunit TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent |
| [B] Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) | RHOS401088 | Q3J3H6 | vitamin B12-dependent ribonucleotide reductase Citation: Borovok,I., et al., Microbiology 148, 391-404 (2002) putative class II ribonucleoside-diphosphate reductase |
| [B] Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) | RHOS500906 | A4WR21 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) | RHOS101135 | A3PIV6 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: rsp:RSP_2495 ribonucleotide-diphosphate reductase alpha subunit TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent |
| [B] Rhodobacter sphaeroides (strain KD131 / KCTC 12085) | RHOSK00800 | B9KQU8 | Ribonucleoside-diphosphate reductase class II |
| [B] Roseobacter denitrificans (strain ATCC 33942 / OCh 114) | ROSDO02953 | Q163Z5 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Silicibacter pomeroyi | SILPO02087 | Q5LRJ1 | identified by similarity to GB:AAR97976.1; match to protein family HMM PF02867 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Silicibacter sp. (strain TM1040) | SILST01149 | Q1GHI2 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: sil:SPO2136 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, ev=0.0, 88% identity TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent: (8e-229) PFAM: ribonucleotide reductase large subunit: (2.5e-09) Ribonucleotide reductase class II vitamin B12-dependent: (2.3e-72) |
| [B] Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) | MAGMM02703 | BAE51550.1 | Ribonucleotide reductase alpha subunit |
| [B] Rhodospirillum centenum (strain ATCC 51521 / SW) | RHOCS00893 | B6ISB3 | B12-dependent ribonucleoside diphosphate reductase |
| [B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) | RHORT02434 | Q2RRK4 | Ribonucleoside-diphosphate reductase |
| [B] Anaeromyxobacter dehalogenans (strain 2CP-C) | ANADE01606 | Q2IIA7 | ribonucleoside diphosphate reductase, B12-dependent |
| [B] Anaeromyxobacter sp. (strain Fw109-5) | ANADF02175 | A7HCF4 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Anaeromyxobacter sp. (strain K) | ANASK02225 | B4UDQ8 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
| [B] Myxococcus xanthus (strain DK 1622) | MYXXD02803 | Q1D887 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent identified by similarity to GB:AAR97976.1; match to protein family HMM PF02867; match to protein family HMM TIGR02504 |
| [B] Sorangium cellulosum (strain So ce56) | SORC500380 | A9GR43 | Putative Ribonucleoside-diphosphate reductase |
| [B] Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) | LEPBP01646 | B0SRJ8 | Ribonucleoside-diphosphate reductase alpha subunit |
| [B] Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) | LEPBA01596 | B0S8R3 | Ribonucleoside-triphosphate reductase, alpha subunit |
| [B] Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) | LEPBJ01073 | Q04TB3 | Ribonucleoside-triphosphate reductase, alpha subunit cytoplasmic protein |
| [B] Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) | LEPBL01260 | Q051N6 | Ribonucleoside-triphosphate reductase, alpha subunit cytoplasmic protein |
| [B] Leptospira interrogans | LEPIN02342 | NRDJ_LEPIN | Vitamin B12-dependent ribonucleotide reductase |
| [B] Leptospira interrogans (serogroup Icterohaemorrhagiae / serovar Copenhageni) | LEPIC01535 | NRDJ_LEPIC | identified by sequence similarity; putative; ORF located using Blastx/Glimmer ribonucleotide reductase protein |
| [B] Akkermansia muciniphila (strain ATCC BAA-835) | AKKM801935 | B2UNR7 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |