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Keyword Protein Sequence Group Entry

OMA Group 184800

diphosphate reductase
This group has 90 members: 90 [B]acteria
Fingerprint: RRKGYTQ

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Acidobacteria bacterium (strain Ellin345)ACIBL01121  UniProtKB/TrEMBL Q1ISM3  Ribonucleoside-diphosphate reductase
[B] Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)ACIC501502  UniProtKB/TrEMBL C1F6S8  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Solibacter usitatus (strain Ellin6076)SOLUE01626  UniProtKB/TrEMBL Q028A2  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: aba:Acid345_1124 ribonucleoside-diphosphate reductase TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent
[B] Frankia alni (strain ACN14a)FRAAA05565  UniProtKB/TrEMBL Q0RDY5  Ribonucleoside-diphosphate reductase M1 chain (Vitamin B12-dependent ribonucleotide reductase) Evidence 2b : Function of strongly homologous gene; Product type e : enzyme
[B] Frankia sp. (strain EAN1pec)FRASN01212  UniProtKB/TrEMBL A8L6K7  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Salinispora arenicola (strain CNS-205)SALAI01372  UniProtKB/TrEMBL A8M7X7  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO01431  UniProtKB/TrEMBL A4X4W9  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Propionibacterium acnesPROAC01012  UniProtKB/TrEMBL Q6A8Y8  ribonucleoside-diphosphate reductase alpha chain
[B] Streptomyces coelicolorSTRCO05770  UniProtKB/Swiss-Prot NRDJ_STRCO  SC4H2.26, nrdJ, ribonucleotide reductase, len: 967 aa; highly similar to Streptomyces clavuligerus TR:E1258368(EMBL:AJ224870) vitamin B12-dependent ribonucleotide reductase (951 aa), fasta scores; opt: 5800 z-score: 5797.4 E():0, 91.3% identity in 958 aa overlap. Contains 2x match to Pfam match to entry ribonucleo_red PF00317, Ribonucleotide reductase, scores 75.54 and 86.71 ribonucleotide reductase
[B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG01588  UniProtKB/TrEMBL B1VXS8  Putative vitamin B12-dependent ribonucleotide reductase
[B] Thermobifida fusca (strain YX)THEFY02140  UniProtKB/TrEMBL Q47MY7  ribonucleotide reductase large subunit
[B] Chlorobaculum parvum (strain NCIB 8327)CHLP800589  UniProtKB/TrEMBL B3QM65  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Chlorobium tepidumCHLTE00571  UniProtKB/TrEMBL Q8KEV4  Ribonucleotide reductase family protein
[B] Chlorobium limicola (strain DSM 245 / NBRC 103803)CHLL200520  UniProtKB/TrEMBL B3EGJ4  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Chlorobium phaeobacteroides (strain BS1)CHLPB00752  UniProtKB/TrEMBL B3ENX4  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Chlorobium phaeobacteroides (strain DSM 266)CHLPD01679  UniProtKB/TrEMBL A1BHC2  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: cte:CT0578 ribonucleotide reductase family protein TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent
[B] Prosthecochloris vibrioformis (strain DSM 265)PROVI01179  UniProtKB/TrEMBL A4SFF2  ribonucleoside-diphosphate reductase class II KEGG: cte:CT0578 ribonucleotide reductase family protein TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent
[B] Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)PELPB00796  UniProtKB/TrEMBL B4SF17  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Prosthecochloris aestuarii (strain DSM 271 / SK 413)PROA200694  UniProtKB/TrEMBL B4S6K8  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)THERP01755  UniProtKB/TrEMBL B9L1R5  B12-dependent ribonucleoside diphosphate reductase
[B] Clostridium acetobutylicumCLOAB01036  UniProtKB/TrEMBL Q97K72  Ribonucleotide reductase, vitamin B12-dependent
[B] Clostridium tetaniCLOTE00465  UniProtKB/TrEMBL Q897Z5  ribonucleoside-diphosphate reductase (vitamin B12-dependent)
[B] Rhodopirellula balticaRHOBA06968  UniProtKB/Swiss-Prot NRDJ_RHOBA  PMID: 8265664 best DB hits: BLAST: pir:T35125; ribonucleotide reductase - Streptomyces coelicolor -----; E=0.0 embl:CAA12167.1; (AJ224870) vitamin B12-dependent ribonucleotide; E=0.0 gb:AAD37499.1; AF111267_1 (AF111267) regulatory protein SCTI; E=1e-119 COG: AF1664; COG0209 Ribonucleotide reductase alpha subunit; E=2e-51 PFAM: PF02867; Ribonucleotide reductase, bar; E=0.0031 ribonucleotide reductase
[B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII901914  UniProtKB/TrEMBL B2IEI0  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)METSB00179  UniProtKB/TrEMBL B8EN30  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Bradyrhizobium japonicumBRAJA04222  UniProtKB/Swiss-Prot NRDJ_BRAJA  Vitamin B12-dependent ribonucleotide reductase
[B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB03954  UniProtKB/TrEMBL A5EJE8  Ribonucleotide reductase large subunit
[B] Bradyrhizobium sp. (strain ORS278)BRASO03272  UniProtKB/TrEMBL A4YTN1  Ribonucleotide reductase large subunit.
[B] Nitrobacter hamburgensis (strain X14 / DSM 10229)NITHX01954  UniProtKB/TrEMBL Q1QLL6  ribonucleotide reductase large subunit
[B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)NITWN01480  UniProtKB/TrEMBL Q3SSA9  ribonucleotide reductase large subunit
[B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)OLICO02723  UniProtKB/TrEMBL B6JGY7  B12-dependent ribonucleoside diphosphate reductase
[B] Rhodopseudomonas palustrisRHOPA02969  UniProtKB/TrEMBL Q6N5J7  observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished ribonucleotide reductase
[B] Rhodopseudomonas palustris (strain BisA53)RHOP502459  UniProtKB/TrEMBL Q07NP5  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent KEGG: rpc:RPC_2380 ribonucleotide reductase large subunit
[B] Rhodopseudomonas palustris (strain BisB18)RHOPB02341  UniProtKB/TrEMBL Q215K3  ribonucleotide reductase large subunit
[B] Rhodopseudomonas palustris (strain BisB5)RHOPS02894  UniProtKB/TrEMBL Q135U9  ribonucleotide reductase large subunit
[B] Rhodopseudomonas palustris (strain HaA2)RHOP202534  UniProtKB/TrEMBL Q2IX12  Ribonucleoside diphosphate reductase, B12-dependent
[B] Rhodopseudomonas palustris (strain TIE-1)RHOPT03262  UniProtKB/TrEMBL B3Q7R1  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Brucella abortusBRUAB00968  UniProtKB/TrEMBL C4IQW3  similar to BR1043, ribonucleotide reductase domain protein ribonucleotide reductase domain protein
[B] Brucella abortus (strain 2308)BRUA201051  UniProtKB/TrEMBL Q2YQ30  Ribonucleotide reductase large subunit
[B] Brucella abortus (strain S19)BRUA100933  UniProtKB/TrEMBL B2S5Q4  Ribonucleotide reductase large subunit
[B] Brucella canis (strain ATCC 23365 / NCTC 10854)BRUC200993  UniProtKB/TrEMBL A9MB55  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Brucella melitensisBRUME00938  UniProtKB/TrEMBL D0B382  VITAMIN B12-DEPENDENT RIBONUCLEOTIDE REDUCTASE
[B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO200903  UniProtKB/TrEMBL A5VQI3  B12-dependent ribonucleoside diphosphate reductase
[B] Brucella suisBRUSU01001  UniProtKB/TrEMBL Q8G0P6  similar to GP:15074488; identified by sequence similarity; putative ribonucleotide reductase domain protein
[B] Brucella suis (strain ATCC 23445 / NCTC 10510)BRUSI01019  UniProtKB/TrEMBL B0CGJ3  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent GO_function: class II ribonucleotide reductase activity [GO ID 0016960]
[B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)OCHA402105  UniProtKB/TrEMBL A6X0U3  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688)METC401138  UniProtKB/TrEMBL B7KQ83  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: mex:Mext_1102 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent
[B] Methylobacterium extorquens (strain PA1)METEP01073  UniProtKB/TrEMBL A9W1Q0  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Methylobacterium nodulans (strain ORS2060 / LMG 21967)METNO05688  UniProtKB/TrEMBL B8IU05  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB01007  UniProtKB/TrEMBL B1ZAX5  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)METRJ00300  UniProtKB/TrEMBL B1LS79  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Methylobacterium sp. (strain 4-46)METS400277  UniProtKB/TrEMBL B0UGP4  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Mesorhizobium sp. (strain BNC1)MESSB01323  UniProtKB/TrEMBL Q11IP7  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit Ribonucleotide reductase class II vitamin B12-dependent KEGG: mlo:mll0136 ribonucleoside-diphosphate reductase alpha chain
[B] Rhizobium lotiRHILO00104  UniProtKB/TrEMBL Q98NH6  ribonucleotide reductase
[B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)PARL103224  UniProtKB/TrEMBL A7HYC1  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK01534  UniProtKB/TrEMBL B9JEB5  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Agrobacterium tumefaciens (strain C58 / ATCC 33970)AGRT501689  UniProtKB/Swiss-Prot NRDJ_AGRT5  Vitamin B12-dependent ribonucleotide reductase
[B] Rhizobium etli (strain CFN 42 / ATCC 51251)RHIEC01706  UniProtKB/TrEMBL Q2K9D8  ribonucleotide-diphosphate reductase protein similar to nrd (SMc01237) [Sinorhizobium meliloti] Similar to swissprot:Q92Q05 Putative location:bacterial cytoplasm Psort-Score: 0.2640; go_component: ribonucleoside-diphosphate reductase complex [goid 0005971]; go_function: ribonucleoside-diphosphate reductase activity [goid 0004748]; go_process: DNA replication [goid 0006260]
[B] Rhizobium etli (strain CIAT 652)RHIE601809  UniProtKB/TrEMBL B3PX11  Putative ribonucleotide-diphosphate reductase protein
[B] Rhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW01398  UniProtKB/TrEMBL B5ZZB4  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Rhizobium leguminosarum bv. viciae (strain 3841)RHIL301946  UniProtKB/TrEMBL Q1MHX2  putative vitamin B12-dependent ribonucleotide reductase similarity:fasta; with=UniProt:O54196_STRCL (EMBL:SCAJ4870); Streptomyces clavuligerus.; nrdJ; Vitamin B12-dependent ribonucleotide reductase.; length=961; id 34.087; 1282 aa overlap; query 1-1271; subject 23-961 similarity:fasta; with=UniProt:Q8UEM4_AGRT5 (EMBL:AE008094); Agrobacterium tumefaciens (strain C58/ATCC 33970).; nrdE; Ribonucleoside-diphosphate reductase 2 alpha chain (AGR_C_3183p).; length=1272; id 88.941; 1275 aa overlap; query 1-1271; subject 1-1272
[B] Rhizobium melilotiRHIME01536  UniProtKB/TrEMBL Q92Q05  Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE RIBONUCLEOTIDE REDUCTASE PROTEIN
[B] Sinorhizobium medicae (strain WSM419)SINMW01209  UniProtKB/TrEMBL A6U8V3  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)AZOC501263  UniProtKB/TrEMBL A8I0K3  Ribonucleotide reductase large subunit
[B] Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)XANP204573  UniProtKB/TrEMBL A7IPE8  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Dinoroseobacter shibae (strain DFL 12)DINSH01769  UniProtKB/TrEMBL A8LMI2  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Jannaschia sp. (strain CCS1)JANSC02464  UniProtKB/TrEMBL Q28PH3  Ribonucleoside-diphosphate reductase
[B] Paracoccus denitrificans (strain Pd 1222)PARDP01320  UniProtKB/TrEMBL A1B1U1  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: rsp:RSP_2495 ribonucleotide-diphosphate reductase alpha subunit TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent
[B] Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)RHOS401088  UniProtKB/TrEMBL Q3J3H6  vitamin B12-dependent ribonucleotide reductase Citation: Borovok,I., et al., Microbiology 148, 391-404 (2002) putative class II ribonucleoside-diphosphate reductase
[B] Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS500906  UniProtKB/TrEMBL A4WR21  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)RHOS101135  UniProtKB/TrEMBL A3PIV6  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: rsp:RSP_2495 ribonucleotide-diphosphate reductase alpha subunit TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase class II vitamin B12-dependent
[B] Rhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK00800  UniProtKB/TrEMBL B9KQU8  Ribonucleoside-diphosphate reductase class II
[B] Roseobacter denitrificans (strain ATCC 33942 / OCh 114)ROSDO02953  UniProtKB/TrEMBL Q163Z5  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Silicibacter pomeroyiSILPO02087  UniProtKB/TrEMBL Q5LRJ1  identified by similarity to GB:AAR97976.1; match to protein family HMM PF02867 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Silicibacter sp. (strain TM1040)SILST01149  UniProtKB/TrEMBL Q1GHI2  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent KEGG: sil:SPO2136 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, ev=0.0, 88% identity TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent: (8e-229) PFAM: ribonucleotide reductase large subunit: (2.5e-09) Ribonucleotide reductase class II vitamin B12-dependent: (2.3e-72)
[B] Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)MAGMM02703   BAE51550.1  Ribonucleotide reductase alpha subunit
[B] Rhodospirillum centenum (strain ATCC 51521 / SW)RHOCS00893  UniProtKB/TrEMBL B6ISB3  B12-dependent ribonucleoside diphosphate reductase
[B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)RHORT02434  UniProtKB/TrEMBL Q2RRK4  Ribonucleoside-diphosphate reductase
[B] Anaeromyxobacter dehalogenans (strain 2CP-C)ANADE01606  UniProtKB/TrEMBL Q2IIA7  ribonucleoside diphosphate reductase, B12-dependent
[B] Anaeromyxobacter sp. (strain Fw109-5)ANADF02175  UniProtKB/TrEMBL A7HCF4  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Anaeromyxobacter sp. (strain K)ANASK02225  UniProtKB/TrEMBL B4UDQ8  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[B] Myxococcus xanthus (strain DK 1622)MYXXD02803  UniProtKB/TrEMBL Q1D887  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent identified by similarity to GB:AAR97976.1; match to protein family HMM PF02867; match to protein family HMM TIGR02504
[B] Sorangium cellulosum (strain So ce56)SORC500380  UniProtKB/TrEMBL A9GR43  Putative Ribonucleoside-diphosphate reductase
[B] Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)LEPBP01646  UniProtKB/TrEMBL B0SRJ8  Ribonucleoside-diphosphate reductase alpha subunit
[B] Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames)LEPBA01596  UniProtKB/TrEMBL B0S8R3  Ribonucleoside-triphosphate reductase, alpha subunit
[B] Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)LEPBJ01073  UniProtKB/TrEMBL Q04TB3  Ribonucleoside-triphosphate reductase, alpha subunit cytoplasmic protein
[B] Leptospira borgpetersenii serovar Hardjo-bovis (strain L550)LEPBL01260  UniProtKB/TrEMBL Q051N6  Ribonucleoside-triphosphate reductase, alpha subunit cytoplasmic protein
[B] Leptospira interrogansLEPIN02342  UniProtKB/Swiss-Prot NRDJ_LEPIN  Vitamin B12-dependent ribonucleotide reductase
[B] Leptospira interrogans (serogroup Icterohaemorrhagiae / serovar Copenhageni)LEPIC01535  UniProtKB/Swiss-Prot NRDJ_LEPIC  identified by sequence similarity; putative; ORF located using Blastx/Glimmer ribonucleotide reductase protein
[B] Akkermansia muciniphila (strain ATCC BAA-835)AKKM801935  UniProtKB/TrEMBL B2UNR7  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent