List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 224291

glycoside hydrolase family 2
This group has 32 members: 32 [B]acteria
Fingerprint: LDACYRD

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Acidobacteria bacterium (strain Ellin345)ACIBL04473  UniProtKB/TrEMBL Q1II16  glycoside hydrolase family 2, TIM barrel
[B] Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ103096  UniProtKB/TrEMBL A5FF80  Glycoside hydrolase family 2, TIM barrel
[B] Bacillus haloduransBACHD02677  UniProtKB/Swiss-Prot BGAL_BACHD  beta-galactosidase
[B] Clostridium perfringens (strain ATCC 13124 / NCTC 8237)CLOP101190  UniProtKB/TrEMBL Q0TRS3  beta-galactosidase identified by similarity to SP:Q56307; match to protein family HMM PF00703; match to protein family HMM PF00746; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929; match to protein family HMM TIGR01167
[B] Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523)LEUMM01239  UniProtKB/Swiss-Prot BGAL_LEUMM  Beta-galactosidase
[B] Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)STRT201268  UniProtKB/TrEMBL Q5M3K5  beta-galactosidase
[B] Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9)STRTD01134  UniProtKB/TrEMBL Q03JT3  Beta-galactosidase
[B] Streptococcus thermophilus (strain CNRZ 1066)STRT101306  UniProtKB/TrEMBL Q5LYZ2  beta-galactosidase
[B] Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)AERHH03941  UniProtKB/Swiss-Prot BGAL_AERHH  beta-galactosidase identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929
[B] Alteromonas macleodii (strain DSM 17117 / Deep ecotype)ALTMD00272  UniProtKB/Swiss-Prot BGAL_ALTMD  Beta-D-galactosidase
[B] Erwinia tasmaniensis (strain DSM 17950 / ET1/99)ERWT902565  UniProtKB/Swiss-Prot BGAL_ERWT9  Beta-galactosidase
[B] Escherichia coli O157:H7 (strain EC4115 / EHEC)ECO5E00371  UniProtKB/Swiss-Prot BGAL_ECO5E  Beta-galactosidase
[B] Escherichia coli O1:K1 / APECECOK100326  UniProtKB/Swiss-Prot BGAL_ECOK1  beta-galactosidase
[B] Escherichia coli O7:K1 (strain IAI39 / ExPEC)ECO7I00323  UniProtKB/TrEMBL B7NK11  Beta-D-galactosidase
[B] Erwinia carotovora (subsp. atroseptica)ERWCT01474  UniProtKB/Swiss-Prot BGAL_ERWCT  Similar to Escherichia coli beta-galactosidase LacZ or b0344 SWALL:BGAL_ECOLI (SWALL:P00722) (1023 aa) fasta scores: E(): 0, 64.84% id in 1024 aa beta-galactosidase
[B] Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)SALAR02717   ABX22680.1  Putative uncharacterized protein
[B] Serratia proteamaculans (strain 568)SERP503151  UniProtKB/Swiss-Prot BGAL_SERP5  Glycoside hydrolase family 2 TIM barrel
[B] Yersinia pestisYERPE01525  UniProtKB/Swiss-Prot BGAL_YERPE  Beta-galactosidase
[B] Yersinia pestis (biovar Antiqua strain Antiqua)YERPA01763  UniProtKB/Swiss-Prot BGAL_YERPA  Beta-galactosidase
[B] Yersinia pestis (biovar Antiqua strain Nepal516)YERPN01889  UniProtKB/Swiss-Prot BGAL_YERPN  Beta-galactosidase
[B] Yersinia pestis (strain Pestoides F)YERPP01689  UniProtKB/Swiss-Prot BGAL_YERPP  Beta-galactosidase
[B] Yersinia pestis bv. Antiqua (strain Angola)YERPG02427  UniProtKB/Swiss-Prot BGAL_YERPG  Beta-galactosidase
[B] Yersinia pseudotuberculosisYERPS02394  UniProtKB/Swiss-Prot BGAL_YERPS  Beta-galactosidase
[B] Yersinia pseudotuberculosis (serotype O:1b / strain IP 31758)YERP301592  UniProtKB/Swiss-Prot BGAL_YERP3  Beta-galactosidase
[B] Yersinia pseudotuberculosis serotype IB (strain PB1/+)YERPB02436  UniProtKB/Swiss-Prot BGAL_YERPB  Glycoside hydrolase family 2 TIM barrel
[B] Yersinia pseudotuberculosis serotype O:3 (strain YPIII)YERPY01708  UniProtKB/Swiss-Prot BGAL_YERPY  Glycoside hydrolase family 2 TIM barrel
[B] Photobacterium profundumPHOPR03327  UniProtKB/Swiss-Prot BGAL_PHOPR  putative beta-galactosidase
[B] Vibrio vulnificusVIBVU04141   NP_763225.1  COG3250 Beta-galactosidase/beta-glucuronidase
[B] Vibrio vulnificus (strain YJ016)VIBVY03394  UniProtKB/Swiss-Prot BGAL_VIBVY  Beta-galactosidase
[B] Thermotoga maritimaTHEMA01177  UniProtKB/Swiss-Prot BGAL_THEMA  Beta-galactosidase
[B] Thermotoga sp. (strain RQ2)THESQ01598  UniProtKB/TrEMBL B1LCQ2  Glycoside hydrolase family 42 domain 5 loop region
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP03583  UniProtKB/TrEMBL B1ZWD9  Glycoside hydrolase family 2 TIM barrel precursor