List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 225939

identified by match to protein family
This group has 5 members: 5 [B]acteria
Fingerprint: LCLGTNQ

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacillus cereus (strain ATCC 10987)BACC103673  UniProtKB/TrEMBL Q733E5  identified by match to protein family HMM PF01183 glycosyl hydrolase, family 25, putative
[B] Bacillus cereus (strain ATCC 14579 / DSM 31)BACCR03486  UniProtKB/TrEMBL Q81AA3  N-acetylmuramoyl-L-alanine amidase
[B] Bacillus cereus (strain G9842)BACC203617  UniProtKB/TrEMBL B7ISL9  N-acetylmuramoyl-L-alanine amidase
[B] Bacillus weihenstephanensis (strain KBAB4)BACWK03269  UniProtKB/TrEMBL A9VPW2  Glycoside hydrolase family 25
[B] Clostridium perfringens (strain ATCC 13124 / NCTC 8237)CLOP101534  UniProtKB/TrEMBL Q0TQS9  glycosyl hydrolase, family 25 identified by match to protein family HMM PF01183