List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 56392

Putative aminotransferase
This group has 16 members: 16 [B]acteria
Fingerprint: LANPLRE

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Mycobacterium bovisMYCBO02307  UniProtKB/Swiss-Prot CBL_MYCBO  Mb2316, -, len: 407 aa. Equivalent to Rv2294, len: 407 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 407 aa overlap). Probable aminotransferase (EC 2.6.1.-), similar to others in M. tuberculosis e.g. MTV030_19, also similar to PATB_BACSU|Q08432 putative aminotransferase b from Bacillus subtilis (387 aa), FASTA scores: opt: 563, E(): 2 .8e-29, (31.4% identity in 408 aa overlap); and to MALY_ECOLI|P23256 maly protein from Escherichia coli (390 aa), FASTA scores: opt: 530, E(): 3.6e-27, (31.3% identity in 384 aa overlap). BELONGS TO CLASS-II OF PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASES. Probable aminotransferase
[B] Mycobacterium bovis (strain BCG / Paris 1173P2)MYCBP02283  UniProtKB/TrEMBL A1KKY6  Probable aminotransferase
[B] Mycobacterium tuberculosisMYCTU03444  UniProtKB/Swiss-Prot CBL_MYCTU  Uncharacterized aminotransferase Rv2294/MT2351
[B] Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)MYCTA02332  UniProtKB/TrEMBL A5U4X7  Putative aminotransferase
[B] Mycobacterium tuberculosis (strain F11)MYCTF02241  UniProtKB/TrEMBL A5WPQ7  hypothetical protein similar to aminotransferase Mapped to H37Rv Rv2294
[B] Frankia sp. (strain EAN1pec)FRASN06144  UniProtKB/TrEMBL A8LG37  Aminotransferase class I and II
[B] Bacteroides fragilisBACFR00991  UniProtKB/TrEMBL Q64XN6  similar to gp:AE016943_183 [Bacteroides thetaiotaomicron VPI-5482], percent identity 77 in 385 aa, BLASTP E(): 0.0 putative aminotransferase
[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN00872  UniProtKB/TrEMBL Q5LGT4  Similar to Bacillus subtilis putative aminotransferase B PatB SWALL:PATB_BACSU (SWALL:Q08432) (387 aa) fasta scores: E(): 4.2e-67, 43.49% id in 384 aa, and to Bacteroides thetaiotaomicron putative aminotransferase BT4138 SWALL:AAO79243 (EMBL:AE016943) (389 aa) fasta scores: E(): 2.9e-129, 77.14% id in 385 aa, and to Yersinia pestis putative aminotransferase YPO3006 SWALL:Q8ZCI3 (EMBL:AJ414154) (393 aa) fasta scores: E(): 3.4e-71, 44.61% id in 390 aa putative aminotransferase
[B] Bacteroides thetaiotaomicronBACTN04093  UniProtKB/TrEMBL Q8A083  Putative aminotransferase
[B] Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)BACV801928  UniProtKB/TrEMBL A6L217  Putative aminotransferase
[B] Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)PARD802005  UniProtKB/TrEMBL A6LDP7  Putative aminotransferase
[B] Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)THET201246  UniProtKB/TrEMBL Q72I76  Putative aminotransferase B
[B] Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)THET801614  UniProtKB/TrEMBL Q5SHW0  Aminotransferase, class I
[B] Lactococcus lactis subsp. cremoris (strain MG1363)LACLM02074   LACLM_Chromosome.2137  
[B] Mesorhizobium sp. (strain BNC1)MESSB03697  UniProtKB/TrEMBL Q11BX1  aminotransferase, class I and II PFAM: aminotransferase, class I and II KEGG: dde:Dde_0276 aminotransferase, classes I and II
[B] Akkermansia muciniphila (strain ATCC BAA-835)AKKM802063  UniProtKB/TrEMBL B2UPN3  Aminotransferase class I and II