List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 274837

Cellulose 1,4-beta-cellobiosidase precursor
This group has 10 members: 10 [B]acteria
Fingerprint: LAHDFTG

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)KINRD03786  UniProtKB/TrEMBL A6WEP7  Cellulose 1,4-beta-cellobiosidase precursor
[B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO02893  UniProtKB/TrEMBL A4X932  Cellulose 1,4-beta-cellobiosidase precursor
[B] Streptomyces coelicolorSTRCO00749  UniProtKB/TrEMBL Q9RJC8  SCF81.24c, cel1, secreted endoglucanase, len: 747 aa; highly similar to SW:GUN1_STRRE (EMBL:X65616) Streptomyces reticulii cellulase 1 precursor (EC 3.2.1.4) (endoglucanase) (endo-1,4-beta-glucanase) (avicelase) Cel1, 746 aa; fasta scores: opt: 4213 z-score: 4621.9 E(): 0; 80.3% identity in 747 aa overlap. Contains two matches to Pfam entries PF00759 Glyco_hydro_9, Glycosyl hydrolase family 9 and to Prosite entry PS00698 Glycosyl hydrolases family 9 active sites signature 2. Also contains N-terminal region signal peptide sequence and a possible helix-turn-helix motif at residues 119..140 (+2.81 SD) secreted endoglucanase
[B] Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)HERA202621  UniProtKB/TrEMBL A9B106  Glycoside hydrolase family 9 precursor
[B] Clostridium acetobutylicumCLOAB00553  UniProtKB/TrEMBL Q97LJ9  Cellulase CelE ortholog; dockerin domain
[B] Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE00713  UniProtKB/TrEMBL B8I7V4  glycoside hydrolase family 9 PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; Carbohydrate-binding CenC domain protein; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: cac:CAC0561 cellulase CelE-like protein
[B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237)CLOTH00395  UniProtKB/Swiss-Prot CELK_CLOTH  Cellulose 1,4-beta-cellobiosidase precursor
[B] Maricaulis maris (strain MCS10)MARMM02712  UniProtKB/TrEMBL Q0AL32  Cellulase
[B] Sorangium cellulosum (strain So ce56)SORC505296  UniProtKB/TrEMBL A9FX20  Putative glycosyl hydrolase
[B] Klebsiella pneumoniae (strain 342)KLEP305511  UniProtKB/TrEMBL B5RK45  Cellulose 1,4-beta-cellobiosidase