List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 191165

D-isomer specific 2-hydroxyacid dehydrogenase
This group has 7 members: 7 [B]acteria
Fingerprint: KWGERAS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)THEP301966  UniProtKB/TrEMBL B0K7C2  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[B] Thermoanaerobacter sp. (strain X514)THEPX00135  UniProtKB/TrEMBL B0K1K1  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[B] Lactobacillus reuteri (strain DSM 20016)LACRD00660  UniProtKB/TrEMBL A5VJC4  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[B] Lactobacillus reuteri (strain JCM 1112)LACRJ00644  UniProtKB/TrEMBL B2G6U0  D-lactate dehydrogenase
[B] Streptococcus agalactiae (serotype III)STRA300665  UniProtKB/Swiss-Prot LDHD_STRA3  similar to D-lactate dehydrogenase Unknown
[B] Streptococcus agalactiae (serotype V)STRA500671  UniProtKB/Swiss-Prot LDHD_STRA5  identified by match to PFAM protein family HMM PF00389 D-lactate dehydrogenase
[B] Streptococcus agalactiae serotype IaSTRA100708  UniProtKB/TrEMBL Q3K210  identified by similarity to SP:P26298; match to protein family HMM PF00389; match to protein family HMM PF02826 D-lactate dehydrogenase